Query= MSMg01no097_n12.b1 MSMg01no097_n12.b1 CHROMAT_FILE:
MSMg01no097_n12.b1 PHD_FILE: MSMg01no097_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:43 2005
(204 letters)
>mm_chr6_80856104_80856707
Length = 604
Score = 325 bits (168), Expect = 1e-93
Identities = 195/204 (95%)
Strand = Plus / Plus
Query: 1 ttactcacttagacagctaatctctcagtcaatgtcaagatagatatgctgactttaaat 60
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ttactcacttagacagctattctctcagtcaatgtcaagatagatatggtgactttaaat 260
Query: 61 gtgccttgttttatgagttccacttttaaggagtgggccaactggaccacactgttctca 120
||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 261 gtgccttattttatgagttccacttttgaggagtggtccaactggaccacactgttctca 320
Query: 121 gttaggcactgaagagttctaattttgcatgactaatttaacctgggtacctttgcaaat 180
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
Sbjct: 321 gttaggcactgaagagttctaattctgcatgattaatttaacctgggtacctttgcattt 380
Query: 181 tccaattatccttcttaacactgc 204
||||||||||||||||||||||||
Sbjct: 381 tccaattatccttcttaacactgc 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_n12.g1 MSMg01no097_n12.g1 CHROMAT_FILE:
MSMg01no097_n12.g1 PHD_FILE: MSMg01no097_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:44 2005
(242 letters)
>mm_chr6_80919285_80919929
Length = 645
Score = 420 bits (217), Expect = e-122
Identities = 235/245 (95%), Gaps = 9/245 (3%)
Strand = Plus / Minus
Query: 1 tggtaagtttcttggttctctctaattttgaaag-tatacatatattcattaaattaata 59
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 443 tggtaagtttcttggttctctctaattttgaaagttatacatatattcattaaattaata 384
Query: 60 tcttcttcatgggatgctcttcataaattgaggtaaacagagcagaacacacaaaatcaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 383 tcttcttcatgggatgctcttcataaattgaggtaaacagagcagaacacataaaatcaa 324
Query: 120 gactcagtttcccacc----tatttatttatttattgccattctgactaaatgtaacatt 175
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gactcagtttcccacctatttatttatttatttattgccattctgactaaatgtaacatt 264
Query: 176 gcttttcttttttaaaatctgctttagtgatgccatatatatatatatatgtagagagag 235
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 gcttttcttttttaaaatctgctttagtgatgcc----atatatatatatgtagagagag 208
Query: 236 agaga 240
|||||
Sbjct: 207 agaga 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 645
Length adjustment: 9
Effective length of query: 233
Effective length of database: 636
Effective search space: 148188
Effective search space used: 148188
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
