CCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGGATCCGCGGA
ATTCTCCTTCTCCTAAGACGTGTCACTCCCTGATTGGCTGCAGCCCATCG
GCCGAGTTGACGTCACGGGGAAGGCAGAGCACATGGAGTGGAGAACCACC
CTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAG
CGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACATCTCCCCCTT
TCCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGATA
GAGGTCAAATCCCCAGTGTGTAGGTAAAGGAGCCATGTACAGGATTAGCT
CTTAGGCTCACAGGCTTTTACCCAGAGCAACCCTGACCTGCTCCCGTGTC
GTTTTGCCTGGAGAGAAGGACACTTGGACACTCAACCTTCTTGAAAGATG
ACATGTCTCCCTAGAATAGGCTCATATATGCCGCAGAGCCTTTCTACTGC
AGTGCTTAGCCGTGCAACTCTCTCGGGCTGCTGAAGCACACTCACTCTAT
CCCGTGCAATGAGACTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCG
ACCTATTGCCTAAGCATAGATATATCAGGGGAAGCTCCATGTTCTAGTCC
TGCAAGCGCCTGGGCAATAACCACCTTGTCTCTCCTAGTTTGGGCCTTAA
GCTTACAGACCAATCAAAGAAG

CAATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTCAGAATCATTCCTTTGTCAGTTATC
ACAAACTTCATGGCATTATTTACATTCATGAAACTAAGCATTTAAGTTAA
GAAAGAGAATGGAAAAAGGTCACCTTTAGAAAGTGTTCGTGCATGAACTT
GCATGTCTGGGGTGCCCAAAGTTTGGTCTCTGAAGCCTGCAGAAACATTA
TTTTTCAGACTGCATGCAACAGCTGAGAAACACAGCAACCCAGTGAGCAG
CAGCTTCTGTTGGAGTGAAATACTTGTATTTGAAAATCATCAGTCCCCTG
GATGCTCAGTTCATTTTCTAACTGTAAATTATTTAGAAAAAGGCATCACC
TCTGGTATTCTAATACATCCCAGGCACTATTTCTCATCATATTTATATGA
GAATGTGAAAATCTCTGTTTTCACCCCCCTTTGGAGCCAAAATAAAATAC
AGTAACACTGCTGAGAATTTGTATATTAAAGCACCAGAGTTATGTTTCCA
AAAATAATCAAGAAATATTCAAATAGAGTCCCTTTATATGTGAGTGAAAT
TGATTAACAGCTCGACACATTTGCAAGTTAATGGGAACGTTAACTCGGTG
TCAGAGAAGAATACAAAGCTAAGAACTTGAAGCCCTCACTCCTCACTCAT
TGTGTGTGCATTGTTTTAATGTGCATN

Query= MSMg01no098_n05.g1 MSMg01no098_n05.g1 CHROMAT_FILE:
MSMg01no098_n05.g1 PHD_FILE: MSMg01no098_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:03 2005
         (575 letters)



>mm_chr6_102067549_102068523
          Length = 975

 Score = 1089 bits (563), Expect = 0.0
 Identities = 572/575 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcagaatcattcctttgtcagttatcacaaacttcatggcattatttacattcatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcagaatcattcctttgtcagttatcacaaacttcatggcattatttacattcatgaa 260

                                                                       
Query: 61  actaagcatttaagttaagaaagagaatggaaaaaggtcacctttagaaagtgttcgtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actaagcatttaagttaagaaagagaatggaaaaaggtcacctttagaaagtgttcgtgc 320

                                                                       
Query: 121 atgaacttgcatgtctggggtgcccaaagtttggtctctgaagcctgcagaaacattatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaacttgcatgtctggggtgcccaaagtttggtctctgaagcctgcagaaacattatt 380

                                                                       
Query: 181 tttcagactgcatgcaacagctgagaaacacagcaacccagtgagcagcagcttctgttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcagactgcatgcaacagctgagaaacacagcaacccagtgagcagcagcttctgttg 440

                                                                       
Query: 241 gagtgaaatacttgtatttgaaaatcatcagtcccctggatgctcagttcattttctaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtgaaatacttgtatttgaaaatcatcagtcccctggatgctcagttcattttctaac 500

                                                                       
Query: 301 tgtaaattatttagaaaaaggcatcacctctggtattctaatacatcccaggcactattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaaattatttagaaaaaggcatcacctctggtattctaatacatcccaggcactattt 560

                                                                       
Query: 361 ctcatcatatttatatgagaatgtgaaaatctctgttttcacccccctttggagccaaaa 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 ctcatcatatttatatgagaatgtgaaaatctctgtttccacccccctttggagccaaaa 620

                                                                       
Query: 421 taaaatacagtaacactgctgagaatttgtatattaaagcaccagagttatgtttccaaa 480
           |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 taaaatacagcaacactgctgagaatttgtatattaaagcaccagaattatgtttccaaa 680

                                                                       
Query: 481 aataatcaagaaatattcaaatagagtccctttatatgtgagtgaaattgattaacagct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aataatcaagaaatattcaaatagagtccctttatatgtgagtgaaattgattaacagct 740

                                              
Query: 541 cgacacatttgcaagttaatgggaacgttaactcg 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 741 cgacacatttgcaagttaatgggaacgttaactcg 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)