Query= MSMg01no099_m18.b1 MSMg01no099_m18.b1 CHROMAT_FILE:
MSMg01no099_m18.b1 PHD_FILE: MSMg01no099_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:26 2005
(557 letters)
>mm_chr6_111446664_111447620
Length = 957
Score = 1062 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Minus
Query: 5 gaattctttgcctcttccggaataggagtcatttgcatttagcagatgtgcaatttgcta 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaattctttgcctcttcaggaataggagtcatttgcatttagcagatgtgcaatttgcta 698
Query: 65 gataaatattttataacacatctatggtataggcaatattacctctgaagtatacctaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gataaatattttataacacatctatggtataggcaatattacctctgaagtatacctaga 638
Query: 125 gatactgagccttagaaaaagctccatagccctcagagtagcatggtgctaagtggagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gatactgagccttagaaaaagctccatagccctcagagtagcatggtgctaagtggagag 578
Query: 185 gcttggatttggagtcagatatgtctccactcaaacctacttgttccatccctgtaatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcttggatttggagtcagatatgtctccactcaaacctacttgttccatccctgtaatgg 518
Query: 245 tcacagcgccttcatgtgctcttccagctcacgttaaccagttgttctagagatgtggca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tcacagcgccttcatgtgctcttccagctcacgttaaccagttgttctagagatgtggca 458
Query: 305 gagcttccaactttattctacttcttctttttctttgaaacaatccttttcctcctccca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gagcttccaactttattctacttcttctttttctttgaaacaatccttttcctcctccca 398
Query: 365 tcgcaccatagaatctcctctgttgacattccgagtggaaaccacacttactttgaaagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcgcaccatagaatctcctctgttgacattccgagtggaaaccacacttactttgaaagt 338
Query: 425 ctttcctaatactcatatactcattcataaatgaggatgtgccaagatcatggatccttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctttcctaatactcatatactcattcataaatgaggatgtgccaagatcatggatccttg 278
Query: 485 tatagtattcattaaaacttagcccttcagcctattgaaattctctgtttgtttgcaaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatagtattcattaaaacttagcccttcagcctattgaaattctctgtttgtttgcaaat 218
Query: 545 atgtctatagtga 557
|||||||||||||
Sbjct: 217 atgtctatagtga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_m18.g1 MSMg01no099_m18.g1 CHROMAT_FILE:
MSMg01no099_m18.g1 PHD_FILE: MSMg01no099_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:26 2005
(253 letters)
>mm_chr6_111395683_111396336
Length = 654
Score = 470 bits (243), Expect = e-137
Identities = 249/251 (99%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 1 ctggagaaa-actgagacttggtgtatgacaacagagaatgcaaggatcccagggctccc 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagaaacactgagacttggtgtatgacaacagagaatgcaaggatcccagggctccc 260
Query: 60 ctgtgcagaagcagtgtaactagacgaagaaatctggacctcagtaccaaagtattacaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 ctgtgcagaagcagtgtaactagacgaagaaatctggacctcagtaccaaagtattagaa 320
Query: 120 atatggtccaggcttttcagagtggggtctatcatttcatctaaaaacataatcagcatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatggtccaggcttttcagagtggggtctatcatttcatctaaaaacataatcagcatg 380
Query: 180 ttctctccagattatagagaggaacaagaaagaaaatggagatgttagaaatcccatagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctctccagattatagagaggaacaagaaagaaaatggagatgttagaaatcccatagt 440
Query: 240 aagcaatgata 250
|||||||||||
Sbjct: 441 aagcaatgata 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 654
Length adjustment: 9
Effective length of query: 244
Effective length of database: 645
Effective search space: 157380
Effective search space used: 157380
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
