TTTTTTNNNTTTTTTTTTNTTTTTTTTTTTTTCNCCCNNNNCNCCTATAA
TCNNTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAAGAGG
ATGCGCGGAATTCAATTGATTTCTGCGCCTGTTTTTGAGCCAATACTATT
GGCGGTTTTATCACTATTTGTTCTGTATTCAGACCTTGTAAATCTTTGAT
GGTAGAGATCTCTAGTATGTTGTTTTCACTCTTCATAATTGTTTTTAGCT
AGTTCTGCATTATCTTTTAGTTGTTTCCATCTCTAATTTGTATCAATTTG
TCTTTTTTAACTATTTTATAAGAACCTGTGTAGAGTAATCTTTAGTGATA
TATTGCATTTATATCTTGTACGCTTGTGTTGCTTTTAGGTCTGGCCAAAA
TTTACTTTTTTTATCTTATCCTATTCCTCTGAGTTATGTAAATATACTAT
TCCTTTCTTACTTATACTCTTCTCTCTATTATCTTTTCTTCTACGTTATT
TATATGTTTGTATCTTTTATATAAAGTCATTATCTTAGCCTTGATTGATA
GTATTCTCTCCACCATTATTTCTATTATTATTATCGATAGCTATACCGTT
TCCACACTCGATATTATTTCCCTTGAATATTTATTTCTCTACTCCTCCAT
CAATTTTTACTCATATTACAGTCCGCCCTAGTTCATTATTATTTTAACAT
CTTACTTCTCCTCGTGTTACTCTTCTTAATGCTAAGCTGCTTTTGCTTAA
TCTGTGCAACTACAATTATACTTTATATATCGCCTTCTCCCCACTCCCCC
CTCTTCTCTCAATTTTTTAACCTCTATTTTACCTCATTTGTCCCTATAAT
TACATCATATCTACCAATTATAACAACCATTCCATCAATTTTTAATATCC
TTATATCTATATATATCTTTATATTTTCTATCTTTTATATTACTATTCTT
T

ATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTGCTCTTGGTTTGCTATTGCTCTTAGTTT
TTAGACAAAAAACTCACTGTGTCATGCATCCTGGTCTCAATCTTATAATC
CTCCTGCCTCACTTTCCTGAAATACCTGACAATGCTCTACTGTTTTTTCA
TTTCTTTCATTTCTTTTATCAAAAGTTTAGTGATTTTGGCCTTCATATTA
CTACCAGACTTGTTTCTAAACTGGCCCTTTTCTGAGAAAAAGCACAAGAA
TTTCCCTTTGCTTCCCCTTTAAAAATCACTTTTAAAATTTGCATCCACAA
TAGAAATATGTATAGATTTATCTAAAAGGAGAAAATAAAAGTAATGAAAC
AGATAAGATTAAAGCAATATTTTATTGCTTTAGGTTTATTTGTTCATATT
TCAAGGTCAACTCCAACAGGCAAACAAGCTTCAAGTTCAATATAAAAAAT
GCAACATACCAATAACTTGTAATTCTCTCAAGGAATAGAAATTGCTAGGG
AGCCATTTATATTTTAGTGGCAAGAATAAATCTATCTTGAGCATGAGTTA
CAAAATCTTTTCACAAAACAGCATTTCATAAGATATTTTACCCAGCTTAC
CATCCATCATAAGACATGACACTTTCTTACGCATATTTAAATGACACTTC
ATAAAACAATCTCACTTACTAAATGGCCTTTTGTCT

Query= MSMg01no101_p09.g1 MSMg01no101_p09.g1 CHROMAT_FILE:
MSMg01no101_p09.g1 PHD_FILE: MSMg01no101_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:23 2005
         (525 letters)



>mm_chr6_12851600_12852524
          Length = 925

 Score =  986 bits (510), Expect = 0.0
 Identities = 522/526 (99%), Gaps = 2/526 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgctcttggtttgctattgctcttagtttttagacaaaaaactcactgtgtcatgcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 ctgctcttggtttgctattgctcttagtttttagacaaaaaactcactgtgtcatgcatt 260

                                                                       
Query: 61  ctggtctcaatcttataatcctcctgcctcactttcctgaaatacctgacaatgctctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtctcaatcttataatcctcctgcctcactttcctgaaatacctgacaatgctctac 320

                                                                       
Query: 121 tgttttttcatttctttcatttcttttatcaaaagtttagtgattttggccttcatatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttttttcatttctttcatttcttttatcaaaagtttagtgattttggccttcatatta 380

                                                                       
Query: 181 ctaccagacttgtttctaaactggcccttttctgagaaaaagcacaagaatttccctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaccagacttgtttctaaactggcccttttctgagaaaaagcacaagaatttccctttg 440

                                                                       
Query: 241 cttcccctttaaaaatcacttttaaaatttgcatccacaatagaaatatgtatagattta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcccctttaaaaatcacttttaaaatttgcatccacaatagaaatatgtatagattta 500

                                                                       
Query: 301 tctaaaaggagaaaataaaagtaatgaaacagataagattaaagcaatattttattgctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctaaaaggagaaaataaaagtaatgaaacagataagattaaagcaatattttattgctt 560

                                                                       
Query: 361 taggtttatttgttcatatttcaaggtcaactccaacaggcaaacaagcttcaagttcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggtttatttgttcatatttcaaggtcaactccaacaggcaaacaagcttcaagttcaa 620

                                                                       
Query: 421 tataaaaaatgcaacataccaataacttgtaattctctcaaggaatagaaattgctaggg 480
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataaaaaatgcaacgtaccaataacttgtaattctctcaaggaatagaaattgctaggg 680

                                                         
Query: 481 agccatttatattttagtg-gcaagaataaatctatcttgagcatg 525
           ||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 681 agccatttatattttagtgag-aagaataaatctatcttgagcatg 725


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)