Query= MSMg01no102_m14.b1 MSMg01no102_m14.b1 CHROMAT_FILE:
MSMg01no102_m14.b1 PHD_FILE: MSMg01no102_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:29 2005
(557 letters)
>mm_chr6_20389720_20390677
Length = 958
Score = 978 bits (506), Expect = 0.0
Identities = 545/558 (97%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 1 atcacatcttgttgcttcactgttacacttgtataagttgaccaatgtagatgcaataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcacatcttgttgcttcactgttacacttgtataagttgaccaatgtagatgcaataac 260
Query: 61 aggtgtgctgtctcagtttgcagaggagaatcatgaatataaacaatattatatgtatct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 aggtgtgctgtctcagtttgcagaggagaagcatgaatataaacaatattatatgtatct 320
Query: 121 aaatttgcaacaattcaagctcaaagaatgacatggtgtctgtgctcctcattatgaact 180
||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 321 aaatttgcaacaagtcaagctcaaagaatgacatggtgtctttgctcctttttatgaact 380
Query: 181 tcaaatatttattaaggagattgtggcacttgagaattactaagggaaagaaaatccttt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tcaaatatttattaaggagattgtggcacttgaggattactaagggaaagaaaatccttt 440
Query: 241 tctttagaggacataatcattacttgaattcccatacttcagcggatgccacactcatgc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tctttagaggacataatcattacttgaattcccatacttcagcgggtgccacactcatgc 500
Query: 301 acacatggggattaacagctagccttagagagttacctaagaaataagatagctatgagc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacatggggaataacagctagccttagagagttacctaagaaataagatagctatgagc 560
Query: 361 cgatgagtgggacaagtttggggatattgtggaaattggatgcagggaacttaggttaga 420
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 561 cgatgagtgggacaagtttggagatactgtggaaattggatgcagggaacttaggttaga 620
Query: 421 taacatgatattccattgcataggtacgtgaaatgctcgagaataatgaaaaattgaatt 480
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 tatcatgatattccattgcataggtacgtgaaatgctcgagaataatgaaaaattgaagt 680
Query: 481 atcttgaaaataaattaataaaa-tgcaaatagtatcaaaacattaaatattttcttgga 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcttgaaaataaattaataaaaatgcaaatagtatcaaaacattaaatattttcttgga 740
Query: 540 gtagaaaataaatgggat 557
||||||||||||||||||
Sbjct: 741 gtagaaaataaatgggat 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_m14.g1 MSMg01no102_m14.g1 CHROMAT_FILE:
MSMg01no102_m14.g1 PHD_FILE: MSMg01no102_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:29 2005
(545 letters)
>mm_chr6_20436887_20437831
Length = 945
Score = 735 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Minus
Query: 162 aatgggacatatatatccaaatcgaatactattaagccataaacataataaaatgttgtc 221
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 945 aatgggacatatatatccaaatcgaataccattaagccataaacataataaaatgttgtc 886
Query: 222 atttatggccaaataaatggactttaagaaacatattttaagcaaaataaagtgatattt 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 atttatggccaaataaatggactttaagaaacatattttaagcaaaataaagtgatattt 826
Query: 282 taaaagacaaatagtacatgttcacttgtattatggaagtcagaataactgatttcatgg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 taaaagacaaatagtacatgttcacttgtattatggaagtcagaataactgatttcatgg 766
Query: 342 gagtagcatatataatagtgacaacttttattccagctcagcaatgtaaggtcataaagg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gagtagcatatataatagtgacaacttttattccagctcagcaatgtaaggtcataaagg 706
Query: 402 aaccatttatattgcaaatgtattctcaaagctccattgtgtacttctcatcaaccatga 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aaccatttatattgcaaatgtattctcaaagctccattgtgtacttctcatcaaccatga 646
Query: 462 gcatcatccacctaactcttcatagtctttgttgtcttatccttcttgtactatttgtat 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcatcatccacctaactcttcatagtctttgttgtcttatccttcttgtactatttgtat 586
Query: 522 cctacccacagcagatatatgaca 545
||||||||||||||||||||||||
Sbjct: 585 cctacccacagcagatatatgaca 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
