TCGTCATAATTTGCGGCGCTATACGACTCCTATTCGAAGAGATCCGCGGA
ATTCATAAATTCCCTACAAGTCACAGAGTTAAACTGTGCCCTTTCCAGTA
GCCAGCCTGTGAAATCTCAACATTTGCTTCTGTTAGAGATAGTAACAAGA
TCTAGAAAGTGTAGATGACAGCCTTAAATGACAATCTTTAGTTCAAGTCT
TTCCCTTTAAATACACTGTAGAGGGAAAGAGAAGATTGCTCAGTGAGTGA
CTGGCTTTTCATGTCTCTCCCCAAAACACTTTTTTTTAAAAAGCGAAATT
CGGTTGCGGTGGTTAGGAGCTTGTCATCTTGTGATGACAACACTGAGGGA
GGTAGAAAAGGGATTCTTAGCCAGTCAGCCTAGCCTTATCTTCAAGTTCT
AGTACAACGAGAGATCTCGCCTCAAAATATAACAGCCCAAACAAACCACA
AGAAAACACAAGGTGGACAGTCCTAGGGAATCATACCCGAGGCTGATGTG
TGGTCTTTACCTGCCCCAACACAAGTTCATGTGCGCACATACACAAAGCT
TATGAGAAAATGAGATTCAACTAAGCAAAGCTTGTGGCTCCTCTAAAACA
TCCATATAAACCCATACTAACCTATCGATTTTCTAATTAGCAAACTAGAA
AAAGCAGTACACTAAATAGATCATAACTTCCATTCCTTTGGTAATTCAGA
AGACA

ATTTACCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGCCAGGAAGTGGGA
GTGGGTGGGTAGGGGAGCAGGGCGTCGTGAGGTTATATCTTCTCGCCCTT
TCTTTTCACTCGTTCCTCTCCTCTTCGTTCCTTCTTCTTCCCCGTCTCCT
TCCCTCGTTTCCGTTTTCTTTCCCTCCCTCTTCCCCCTTTTCCCGCCTTC
CTTGTTTCCACCTCCTTTTTCTTTTCTCTTCCCTTTACTTTTTTCTTCCT
CTTTCCCCCTCCACTCACCCCCCCCTTTTTTCCCCCCTCTCTTTTCTTCC
TCCTTTTTTCCCTACGACTTTTTCCCCCCCCTTTTCTATCTTCCCTCCTC
CCCCTCCCCCCACTAACTATTATTTCCTTTCTTTCTTCTTTCTCCCCCCC
CGCCCCCTTTTTACTTTATTTCCCTCCTCCTTATCCACCCTTCTCCCTTC
CATCCCCCTTTCCCTCTCCCCCTCCATTCCCCCCCTTTTCTTTTCTTTTC
CTTTTTCCCCCCACCACTCCCCCCTCTCTTACATGTCCCCTCTCCCATTA
CATCTCCCCTCTTTCTCCACCCACCCTATTCCTCTTTTCTCCCCCCCACC
CCTCTCTCTCTTATATCTATCCATCACCCCCCCCCCCTTTATATTCCTCC
TCCTTTCTCCCCTCCTCCTCACTCCTCTTATTCCCGCTCTCTTTATCCCA
TATCTTTTATTCCCTCTTCCCTCTCACATTTCTCCCCTCCCACCCTCCCT
CCCCCTCCTCTTTTCCCCT

Query= MSMg01no103_k02.b1 MSMg01no103_k02.b1 CHROMAT_FILE:
MSMg01no103_k02.b1 PHD_FILE: MSMg01no103_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:37 2005
         (502 letters)



>mm_chr6_77145938_77146839
          Length = 902

 Score =  907 bits (469), Expect = 0.0
 Identities = 490/497 (98%)
 Strand = Plus / Plus

                                                                       
Query: 6   cacagagttaaactgtgccctttccagtagccagcctgtgaaatctcaacatttgcttct 65
           ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cacagagataaactctgccctttccagtagccagcctgtgaaatctcaacatttgcttct 265

                                                                       
Query: 66  gttagagatagtaacaagatctagaaagtgtagatgacagccttaaatgacaatctttag 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gttagagatagtaacaagatctagaaagtgtagatgacagccttaaatgacaatctttag 325

                                                                       
Query: 126 ttcaagtctttccctttaaatacactgtagagggaaagagaagattgctcagtgagtgac 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttcaagtctttccctttaaatacactgtagagggaaagagaagattgctcagtgagtgac 385

                                                                       
Query: 186 tggcttttcatgtctctccccaaaacacttttttttaaaaagcgaaattcggttgcggtg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 386 tggcttttcatgtctctccccaaaacacttttttttaaaaagcgaaatttggatgtggtg 445

                                                                       
Query: 246 gttaggagcttgtcatcttgtgatgacaacactgagggaggtagaaaagggattcttagc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttaggagcttgtcatcttgtgatgacaacactgagggaggtagaaaagggattcttagc 505

                                                                       
Query: 306 cagtcagcctagccttatcttcaagttctagtacaacgagagatctcgcctcaaaatata 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cagtcagcctagccttatcttcaagttctagtacaacgagagatctcgcctcaaaatata 565

                                                                       
Query: 366 acagcccaaacaaaccacaagaaaacacaaggtggacagtcctagggaatcatacccgag 425
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 566 acagcccaaacaaaccacaagaaaacacaaggtggacagtcctagggaatcataccagag 625

                                                                       
Query: 426 gctgatgtgtggtctttacctgccccaacacaagttcatgtgcgcacatacacaaagctt 485
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gctgatgtgtggcctttacctgccccaacacaagttcatgtgcgcacatacacaaagctt 685

                            
Query: 486 atgagaaaatgagattc 502
           |||||||||||||||||
Sbjct: 686 atgagaaaatgagattc 702


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)