Query= MSMg01no104_f17.b1 MSMg01no104_f17.b1 CHROMAT_FILE:
MSMg01no104_f17.b1 PHD_FILE: MSMg01no104_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:35 2005
(529 letters)
>mm_chr6_79452784_79453712
Length = 929
Score = 1015 bits (525), Expect = 0.0
Identities = 528/529 (99%)
Strand = Plus / Plus
Query: 1 cacttgctcattgtctttatgctcactgtgaataacaatactaaattaaatcactataga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgctcattgtctttatgctcactatgaataacaatactaaattaaatcactataga 260
Query: 61 ccaataaatgtactttgtttaattaaaaaacttaaaaaattgggcaatttggttaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaataaatgtactttgtttaattaaaaaacttaaaaaattgggcaatttggttaaaaag 320
Query: 121 ggacgcaaacattatcaaaactcagttaaaataatgtagataaaattatgatttatacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacgcaaacattatcaaaactcagttaaaataatgtagataaaattatgatttatacat 380
Query: 181 ttaaatattaaatacataagaaaatttaattttggatttaaatttcattggaaaaataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaatattaaatacataagaaaatttaattttggatttaaatttcattggaaaaataag 440
Query: 241 tcagacatcatttcacctgatacgcaaaggcatgaaaagcatatctctttcaaattcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagacatcatttcacctgatacgcaaaggcatgaaaagcatatctctttcaaattcact 500
Query: 301 cttgtggattggtatgacactaacactacaatcagaatctatcagctataagccctcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgtggattggtatgacactaacactacaatcagaatctatcagctataagccctcgaa 560
Query: 361 ttgtcaatcaaatatttgttagttgaattaaaaggaatatgttatgcaaacattataacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtcaatcaaatatttgttagttgaattaaaaggaatatgttatgcaaacattataacc 620
Query: 421 agtgtgtttaactgtatacctatctatatctatttatctacctctctatatatttgttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgtgtttaactgtatacctatctatatctatttatctacctctctatatatttgttca 680
Query: 481 tagttttaaaatataatagttttccaaataactaaaatagaggaaatac 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagttttaaaatataatagttttccaaataactaaaatagaggaaatac 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_f17.g1 MSMg01no104_f17.g1 CHROMAT_FILE:
MSMg01no104_f17.g1 PHD_FILE: MSMg01no104_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:36 2005
(543 letters)
>mm_chr6_79604738_79605680
Length = 943
Score = 1035 bits (535), Expect = 0.0
Identities = 541/543 (99%), Gaps = 1/543 (0%)
Strand = Plus / Minus
Query: 1 catggtagatatattcaaactgatttaaccaccacatgatatatacgtttattgaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 catggtagatatattcaaactgatttaaccaccacatgatatatacgtttattgaaaaat 543
Query: 61 tacatgggacttgatagtatcttcaaagtttatattttagaaaattattaaaaataattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tacatgggacttgatagtatcttcaaagtttatattttagaaaattattaaaaataattt 483
Query: 121 taacctgaaaaaaatcatattagctcatgtctcaatgttgaatttcttcaaagaaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taacctgaaaaaaatcatattagctcatgtctcaatgttgaatttcttcaaagaaatgaa 423
Query: 181 acactttaaatactgggttcacaaaacgtacatagtctcaatacagttgtatttaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acactttaaatactgggttcacaaaacgtacatagtctcaatacagttgtatttaaaggt 363
Query: 241 cattaataaagtatttgatccaaaatgccttcagatatgtctattaatactcaagtctct 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cattaataaagtatttgatccgaaatgccttcagatatgtctattaatactcaagtctct 303
Query: 301 gatataaaatgtcattgtattttcacatagtcaacaaaaactctgcagcctctttaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatataaaatgtcattgtattttcacatagtcaacaaaaactctgcagcctctttaaaat 243
Query: 361 catctcagagtagttataatttttaacataatagattcactattaaatacttgatctaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 catctcagagtagttataatttttaacataatagattcactattaaatacttgatctaca 183
Query: 421 tcttttaaaagtggcaggtaattctaaattttttttcattttgaatttgtagatgaataa 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 182 tcttttaaaagtggcaggtaattctaaa-tttttttcattttgaatttgtagatgaataa 124
Query: 481 catagagatctaaaagaccagctgtattaaaattctttaaatatggttaagaaaaattgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 catagagatctaaaagaccagctgtattaaaattctttaaatatggttaagaaaaattgg 64
Query: 541 aat 543
|||
Sbjct: 63 aat 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
