Query= MSMg01no110_a17.b1 MSMg01no110_a17.b1 CHROMAT_FILE:
MSMg01no110_a17.b1 PHD_FILE: MSMg01no110_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:29 2005
(632 letters)
>mm_chr6_17126618_17127649
Length = 1032
Score = 1151 bits (595), Expect = 0.0
Identities = 619/627 (98%)
Strand = Plus / Minus
Query: 6 ggaattcccttccacagcaaccttggccttgcagctgaagggctgggcgattcaaaggaa 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggaattcccttccacaggaaccttggccttgcagctgaagggctgggcgattcaaaggaa 773
Query: 66 atctgctgcagagtttcctaggctggggaagcacaccctgacccagagggtgctcttgtg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 atctgctgcagagtttcctaggctggggaagcacaccctgacccagagggtgctcttgtg 713
Query: 126 tggaaggccaatgctagttaagaatagaaacaagctgtgtggccagaaggctgagaatga 185
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tggaaggccaacgctagttaagaatagaaacaagctgtgtggccagaaggctgagaatga 653
Query: 186 tttcctcatgtctgttgtcatcgttgtcctgcagttttctctatgcctcccttctctctg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 652 tttcctcatgtctgttgtcatcgttgtcctgcagttttctctatgcctcccttctttctg 593
Query: 246 ccatctccttgtccctggccgtaaactttagtgatgggtgcaatagcaacagcacgtaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 592 ccatctccttgtccctggccgtaaactttagtgatgggtgcaatagcaacagcacgtgaa 533
Query: 306 acagaagaccaaatcagaatttcttctttgaaggcatgtgagaggaacaggttaaacctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 acagaagaccaaatcagaatttcttctttgaaggcatgtgagaggaacaggttaaacctc 473
Query: 366 taccaaaagaatgttaagagtgtggcctctacgagtctctaagagaacaagtcaactgca 425
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 472 taccaaaagaatgttaagagtgtggcctcgacgagtctctaagagaacaagccaactgca 413
Query: 426 gatttgtatcttattttcaaggaaggaggccagcacactccctgcatggcctgggtaaca 485
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 412 gatttgtatcttattttcaaggaaggaggccagcgcactccctgcatggcctgggtaaca 353
Query: 486 caagtcgtacggaatcaccactggcttttctggtttctgaaaacttcagagagaaggagt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caagtcgtacggaatcaccactggcttttctggtttctgaaaacttcagagagaaggagt 293
Query: 546 tcagctcaaatctctcccaactaatttaaaaataatacaaatctttttttaaaccaagaa 605
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 292 tcagctcaaatctctcccaactaatttaaaaataatgcaaatctttttttaaaccaagaa 233
Query: 606 aataatgagtgaaaattattggacgct 632
|||||||||||||||||||||||||||
Sbjct: 232 aataatgagtgaaaattattggacgct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_a17.g1 MSMg01no110_a17.g1 CHROMAT_FILE:
MSMg01no110_a17.g1 PHD_FILE: MSMg01no110_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:29 2005
(105 letters)
>mm_chr6_16947636_16948142
Length = 507
Score = 186 bits (96), Expect = 4e-52
Identities = 102/104 (98%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 4 tcccctgagaggcaacccactctcc-tgaaatagttctatatccaagc-tacacagaaaa 61
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 204 tcccctgagaggcaacccactctccatgaaatagttctatatccaagcatacacagaaaa 263
Query: 62 cactacctgggtgggggagaagttggataaagggagggagggaa 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cactacctgggtgggggagaagttggataaagggagggagggaa 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 507
Length adjustment: 8
Effective length of query: 97
Effective length of database: 499
Effective search space: 48403
Effective search space used: 48403
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
