Query= MSMg01no110_b05.b1 MSMg01no110_b05.b1 CHROMAT_FILE:
MSMg01no110_b05.b1 PHD_FILE: MSMg01no110_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:31 2005
(506 letters)
>mm_chr6_4448656_4449561
Length = 906
Score = 955 bits (494), Expect = 0.0
Identities = 500/502 (99%)
Strand = Plus / Plus
Query: 5 gaattcctaatttcctgggtctgacagaggacatgaaaattcatgttctttaacacattc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaatttgctgggtctgacagaggacatgaaaattcatgttctttaacacattc 264
Query: 65 taagacgatgccaataacacgggttccggggaccacacttaaagaattgcaggagtggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagacgatgccaataacacgggttccggggaccacacttaaagaattgcaggagtggag 324
Query: 125 ggatccactttatcttttacaggactcagatattcaagttgctgcaaacgttaaatactt 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatccactttatctttcacaggactcagatattcaagttgctgcaaacgttaaatactt 384
Query: 185 ccaagcaacctttgtaaatgttcagtgttgttttaaaggaaagagtcagagaccacaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaagcaacctttgtaaatgttcagtgttgttttaaaggaaagagtcagagaccacaata 444
Query: 245 agagatcagccatctgctcaacagatctaccatgaactggctagtctcatgcctctcctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagatcagccatctgctcaacagatctaccatgaactggctagtctcatgcctctcctg 504
Query: 305 attcctcattataaaatgtatcagttattgaatggtgtttatcaaacgactaccccatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attcctcattataaaatgtatcagttattgaatggtgtttatcaaacgactaccccatta 564
Query: 365 cagacccttgttcgaaatatggcagaaatagattttgactttctgtactgggtacctaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagacccttgttcgaaatatggcagaaatagattttgactttctgtactgggtacctaca 624
Query: 425 aagatttggaagatgcttggcttaccctacaacccttcatgcatctgttcttcatacatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagatttggaagatgcttggcttaccctacaacccttcatgcatctgttcttcatacatt 684
Query: 485 tctcttaacaaaataaaaagtc 506
||||||||||||||||||||||
Sbjct: 685 tctcttaacaaaataaaaagtc 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_b05.g1 MSMg01no110_b05.g1 CHROMAT_FILE:
MSMg01no110_b05.g1 PHD_FILE: MSMg01no110_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:32 2005
(277 letters)
>mm_chr6_4602528_4603204
Length = 677
Score = 528 bits (273), Expect = e-154
Identities = 276/277 (99%)
Strand = Plus / Minus
Query: 1 actgctgagagtccttacctggaattcagctaccctagggtcccagagggaaacatcgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 actgctgagagtccttacctggaattcagctaccctagggtcccagagggaaacatcgta 418
Query: 61 acatacgtggcaggagcgacctcttttggagaaacttagactctaacactctagaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 acatacgtggcaggagcgacctcttttggagaaacttagactctaacactctagaggtag 358
Query: 121 gccaagattctctttaggaagaaaaataatattgagtttgtgttctcatccagacagatg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 357 gccaagattctctttaggaagaaaaataatattgagtttgtgttctcacccagacagatg 298
Query: 181 gaccatttagtttccaaatttccgcttaatataatctagtcttaattaattttagtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaccatttagtttccaaatttccgcttaatataatctagtcttaattaattttagtttgg 238
Query: 241 aaaaggttggaggaagcataagaaaatacagtggcta 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaaaggttggaggaagcataagaaaatacagtggcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
