Query= MSMg01no110_g24.b1 MSMg01no110_g24.b1 CHROMAT_FILE:
MSMg01no110_g24.b1 PHD_FILE: MSMg01no110_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:01 2005
(373 letters)
>mm_chr6_52870576_52871347
Length = 772
Score = 627 bits (324), Expect = 0.0
Identities = 351/360 (97%), Gaps = 1/360 (0%)
Strand = Plus / Minus
Query: 11 gaattcacttctaattatcaggaattgttttaagattttcacctaaagcccagtttttta 70
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaattcacttctaattattaggaattgttttaagattttcacctaaagcccagtttttta 510
Query: 71 gtgacctaaaacataagtggaaattttctctgaatttcctatgcttatttgtgatatttt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtgacctaaaacataagtggaaattttctctgaatttcctatgcttatttgtgatatttt 450
Query: 131 gaaaagaatttttgtaggaactcagtttgatccataattgtaaaggtttagcggtggtgg 190
|||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 449 gaaaagaacttttgtagaaactcagtttgatccataattgtaaaggtttagcagtggtgg 390
Query: 191 tgactgtggtatgcctgccattatgtacactgagaaagaggaaatgagctggtagtgacc 250
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgaccgtggtatgcctgccattatgtacactgagaaagaggaaatgagctggtagtgacc 330
Query: 251 tacagatctgtagtgccgtgattacagagctgtagtgccatgatctacagagctgtagtg 310
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tacagagctgtagtgccgtgattacagagctgtagtgccatgatctacagagctgtagtg 270
Query: 311 ccgtgatctacagacatgtagtgccgcgatctacagacatgtagtgccgtgatctacaga 370
|| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 269 ccatgatctacagacatgtagtgccgtgatctacagacatgtagtgccgtgat-tacaga 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 772
Length adjustment: 9
Effective length of query: 364
Effective length of database: 763
Effective search space: 277732
Effective search space used: 277732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_g24.g1 MSMg01no110_g24.g1 CHROMAT_FILE:
MSMg01no110_g24.g1 PHD_FILE: MSMg01no110_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:01 2005
(304 letters)
>mm_chr6_52725552_52726255
Length = 704
Score = 513 bits (265), Expect = e-150
Identities = 277/281 (98%), Gaps = 2/281 (0%)
Strand = Plus / Plus
Query: 1 tctcaggacagctctgctgctctacagccacagggcagctcagcatcttgctgggaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggacagctctgctgctctacagccacagggcagctcagcatcttgctgggaggag 260
Query: 61 tggctaggggtttctctgtgctatgtcacctggcattctgaatcagtaagggacacagtt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctaggggtgtctctgtgctatgtcacctggcattctgaatcagtaagggacacagtt 320
Query: 121 ccctcacagccactagagccatccgctactcagttcctgcagcacagggtcactaagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcacagccactagagccatccgctactcagttcctgcagcacagggtcactaagttt 380
Query: 181 gctcttggccttaacaggagagagcattcaaagcccatgtgaacccaggcttcgatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcttggccttaacaggagagagcattcaaagcccatgtgaacccaggcttcgatagag 440
Query: 241 gaagaggttgctagagactcttcaacgaat-aagggtgggg 280
|||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 441 gaagaggttgctagagactcttcaac-aattaagggagggg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
