Query= MSMg01no115_f11.b1 MSMg01no115_f11.b1 CHROMAT_FILE:
MSMg01no115_f11.b1 PHD_FILE: MSMg01no115_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:16 2005
(361 letters)
>mm_chr6_126948285_126949046
Length = 762
Score = 605 bits (313), Expect = e-177
Identities = 329/335 (98%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 30 cactgaaaaaaagaaaaccctgtgccataaaaattagcttgcattaaaactattttttag 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cactgaaaaaaagaaaaccctgtgccataaaaattagcttgcattaaaactattttttag 703
Query: 90 ctctttggctctcaccttttttactctctagacctccttctctctttcctccccccccc- 148
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 702 ctctttggctctcaccttttttactctctagccctccttctctctttcctccccccccct 643
Query: 149 -cacgtggccatggccggcctctctctttctaccttctctcctttctccctgcctttcta 207
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ccacgtggccatggccggcctctctctttctaccttctctcctttctccctgcctttcta 583
Query: 208 caataaagttctaaaaccattaaaaaccctattttttaaaaaaa-catagacaataaact 266
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 582 caataaagttctaaaaccattaaaaaccctatttttaaaaaaaaacatagacaataaact 523
Query: 267 attaaaatggagaaatataaaaatagtcaggccaactttgaaagagaacaaaattgaaaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 attaaaatggagaaatataaaaatagtcaggccaactttgaaagagaacaaaattgaaaa 463
Query: 327 tttgaagtctcagttcaagacttctacaaagctac 361
||||||||||||||||||||||||||| |||||||
Sbjct: 462 tttgaagtctcagttcaagacttctacgaagctac 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 762
Length adjustment: 9
Effective length of query: 352
Effective length of database: 753
Effective search space: 265056
Effective search space used: 265056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_f11.g1 MSMg01no115_f11.g1 CHROMAT_FILE:
MSMg01no115_f11.g1 PHD_FILE: MSMg01no115_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:16 2005
(467 letters)
>mm_chr6_126822443_126823309
Length = 867
Score = 818 bits (423), Expect = 0.0
Identities = 456/467 (97%)
Strand = Plus / Plus
Query: 1 caagcaagcatggccacatccaacaaaactttgtcttgctcatttcaagaacacttactt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagcaagcatcgccacatccaacaaaactttgtcttgctcatttcaagaacacttactt 260
Query: 61 caatttctgttgtgggaattttgatttctggaaaagctcatggttggggccatgacctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatttctgttgtgggaattttgatttctggaaaagctcatggttggggccatgacctat 320
Query: 121 actttctatgcatttctacagtgaagacaggatgtacaaatacaagcttatgcccagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 actttctatgcatttctacagtgaagacaggatgtacaaatacaagcttatgcccggagg 380
Query: 181 aggtttggtcccctcaggttatcaggggaatggcagtgctctgtgcacatggctggatgc 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtttggtcccctcagggtatcaggggaatggcagtgctctgtgcacatggctggatat 440
Query: 241 ctgcttcggccattctcattgtatgcttgggaagagagctaaacctgagctgctgagacc 300
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ctgcttcgggcattctcattgtatgcttgggaagagaactaaacctgagctgctgagacc 500
Query: 301 aggacgtgagtttgctctgtgactacccatgagcctcactcacccaagcccctttgcttt 360
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 501 aggacgtgagtttgctctgtgacttcccatgagcctcactcaggcaagcccctttgcttt 560
Query: 361 tccaggcaccatctcctgaggtgagatggagccctgttgtacctccagctctaacactct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccaggcaccatctcctgaggtgagatggagccctgttgtacctccagctctaacactct 620
Query: 421 agggttctgaggtgtatgggaacaatcccctaagacccaggttggtc 467
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggttccgaggtgtatgggaacaatcccctaagacccaggttggtc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
