Query= MSMg01no116_f21.b1 MSMg01no116_f21.b1 CHROMAT_FILE:
MSMg01no116_f21.b1 PHD_FILE: MSMg01no116_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:36 2005
(388 letters)
>mm_chr6_120786547_120787337
Length = 791
Score = 717 bits (371), Expect = 0.0
Identities = 385/391 (98%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 1 aagcgtgtgccattcacttagaccgattatagattagcttcgctagtggtgccctgtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aagcgtgtgccattcacttagaccgattatagattagcttcgctagtggtgtcctgtcac 260
Query: 61 agtgtgaaggcttgtttctcagtctcagcgctggctgcgttttgacacccattcacggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgtgaaggcttgtttctcagtctcagcgctggctgcgttttgacacccattcacggtc 320
Query: 121 ccacgcca---ccccccacccccaagacaaaacaaaacagactaggtcttcttaccacac 177
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacgccacccccccccacccccaagacaaaacaaaacagactaggtcttcttaccacac 380
Query: 178 gaaggcgatgcctttcacagtgattcggggttttttgtttttctctttttaaaatccctc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggcgatgcctttcacagtgattcggggttttttgtttttctctttttaaaatccctc 440
Query: 238 ctcacattttcgcggtatcctgcatttcttgcctttacattatagtcctgtgaaggaggg 297
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcacattttcgcggcatcctgcatttcttgcctttacattatagtcctgtgaaggaggt 500
Query: 298 agcctaggctaagttgaggattttacttaggggtaaaaattgaagcgatctgcccagaaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcctaggctaagttgaggattttacttaggggtaaaaattgaagcgatctgcccagaaa 560
Query: 358 ttcacatgcttttgactgatagttcggctaa 388
|||||||||||||||||||||||||||||||
Sbjct: 561 ttcacatgcttttgactgatagttcggctaa 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 791
Length adjustment: 9
Effective length of query: 379
Effective length of database: 782
Effective search space: 296378
Effective search space used: 296378
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_f21.g1 MSMg01no116_f21.g1 CHROMAT_FILE:
MSMg01no116_f21.g1 PHD_FILE: MSMg01no116_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:36 2005
(236 letters)
>mm_chr6_120964501_120965136
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Minus
Query: 1 gagcttaagtttttatcttgttgccaacagatgtacaggactcttcatgctgacagccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gagcttaagtttttatcttgttgccaacagatgtacaggactcttcatgctgacagccgt 373
Query: 61 ggcgagcaggatccccacctcaagagggtaaaagcatgagcctgtggcacggggtgctga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggcaagcaggatccccacctcaagagggtaaaagcatgagcctgtggcacggggtgctga 313
Query: 121 gagcccacctttggggcacgctgtgtggtggggcagagggaagggagtgtggagaaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 312 gagcccacctttggggcacgctgtgtggtggggcagagggaagggagcgtggagaagagc 253
Query: 181 cccttctcctagctttctgcacacttgtcacccagccaagagccagaactct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cccttctcctagctttctgcacacttgtcacccagccaagagccagaactct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
