Query= MSMg01no116_n09.b1 MSMg01no116_n09.b1 CHROMAT_FILE:
MSMg01no116_n09.b1 PHD_FILE: MSMg01no116_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:12 2005
(652 letters)
>mm_chr6_112506631_112507682
Length = 1052
Score = 1176 bits (608), Expect = 0.0
Identities = 638/648 (98%)
Strand = Plus / Minus
Query: 5 gaattcctgcccatgcttaaggccctgtaaagccccccaatgtcctgttgtatggaatcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gaattcctgcccatgtttaaggccctgtaaagccccccaatgtcctgttgtatggaatcc 793
Query: 65 attttcctctccttttttcaatagccagtctccctgccaatgaggactgtacatttcatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 attttcctctccttttttcaatagccagtctccctgccaatgaggactgtacatttcatg 733
Query: 125 tacacataactcagtgcacagtgcactggttcacaatcatgttaacaacatgttggctta 184
||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 732 tacgcatccctcagtgcacagtgcactggtccacaatcatgttaacaacatgttggctta 673
Query: 185 gtcactgggtctttattctggcacctaatagttttggttctgtagtttcttgtttacatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtcactgggtctttattctggcacctaatagttttggttctgtagtttcttgtttacatg 613
Query: 245 tctttgcttctccagtgggccagagtcttcagtggcacagtggacatgactgttatcatt 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tctttgcttcttcagtgggccagagtcttcagtggcacagtggacatgactgttatcatt 553
Query: 305 attgctctagaacccaatccacgacctgtccattggctgaatgtacccttgctgtttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attgctctagaacccaatccacgacctgtccattggctgaatgtacccttgctgtttttt 493
Query: 365 aggaaactctcattttcttctcagaattctacaagtggccaacctctctttaaattagtt 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 492 aggaaactcccattttcttctcagaattctacaagtggccaacctctctttaagttagtt 433
Query: 425 tgctttactcttgcccacaggcacccaaggcaaggcatgttggctaaggacaaaggaatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgctttactcttgcccacaggcacccaaggcaaggcatgttggctaaggacaaaggaatt 373
Query: 485 tagtcctttgctccatagcaatttttaaaaagtgattttgtaattgtctggacttggctg 544
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 372 tagtcctttgctccatagcaattttcaaaaagtgattttgtaattgtctggacttggctg 313
Query: 545 gccaagaacaggggatgaagaaagaagccaaaaagagcattcctttttgcagtggaaact 604
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 312 gccaagaacaggggatgaagaaagaagccataaagagcattcctttttgcagtggaaact 253
Query: 605 gaaccgaggacagggccagcagccagggagtcagtctttgctctctgt 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaaccgaggacagggccagcagccagggagtcagtctttgctctctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_n09.g1 MSMg01no116_n09.g1 CHROMAT_FILE:
MSMg01no116_n09.g1 PHD_FILE: MSMg01no116_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:12 2005
(626 letters)
>mm_chr6_112473589_112474615
Length = 1027
Score = 1151 bits (595), Expect = 0.0
Identities = 619/627 (98%), Gaps = 1/627 (0%)
Strand = Plus / Plus
Query: 1 tggagctgttgagacagtttggcaggtaaaggcatcggacaccctgagtttggtccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggagctgttgagacagtttggcaggtaaaggcatcggacaccctgagtttggtccttgg 260
Query: 61 tccacaaggtgaaaggagagaactaaggcgaggtgtcctctgacctccacacataagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tccacaaggtgaaaggagagaactaaggcgaggtgtcctctgacctccacatataagcca 320
Query: 121 ttctatgagtataacctcactacacaatgactgactgagcaagtaagtgagtgaatgaat 180
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 321 ttctatgagtataacctcactacacaatgactgactgggcgagtaagtgagtgaatgaat 380
Query: 181 gaatgatgaatgaatgaaatggatgttaacaaaagttcaaaaaaccaattctgatgctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatgatgaatgaatgaaatggatgttaacaaaagttcaaaaaaccaattctgatgctga 440
Query: 241 gctggggtgagctaaagatttccacaacgaaatcaagataaccatgcacccacaacattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctggggtgagctaaagatttccacaacgaaatcaagataaccatgcacccacaacattg 500
Query: 301 aggctgagaaaacccatcaaatactgtaaaggaaaagacaggaaaaatgactaaatgcaa 360
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 agactgagaaaacccatcaaatactgtaaaggaaaaaacaggaaaaatgactaaatgcaa 560
Query: 361 gaagtgacggcttcctggcccttagttcccaccagagaggacacaaggaaatccagaggg 420
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagcgccggcttcctggcccttagttcccaccagagaggacacaaggaaatccagaggg 620
Query: 421 atacaggg-aggcccagtttctgatgatgtgaggaacccgtgaacaaccccagcccctga 479
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacaggggaggcccagtttctgatgatgtgaggaacccgtgaacaaccccagcccctga 680
Query: 480 gacacagagagaagaggcacggtcagaaaacagagcatttgtgctggggtgggtgtagca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacacagagagaagaggcacggtcagaaaacagagcatttgtgctggggtgggtgtagca 740
Query: 540 aggatattcttgtgaagagaaatatttttcattctgttttaatagccttgaaaatattaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggatattcttgtgaagagaaatatttttcattctgttttaatagccttgaaaatattaa 800
Query: 600 tgtctttgcttcaacgaacttatttta 626
|||||||||||||||||||||||||||
Sbjct: 801 tgtctttgcttcaacgaacttatttta 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
