Query= MSMg01no118_g05.b1 MSMg01no118_g05.b1 CHROMAT_FILE:
MSMg01no118_g05.b1 PHD_FILE: MSMg01no118_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:13 2005
(657 letters)
>mm_chr6_91406054_91407109
Length = 1056
Score = 1178 bits (609), Expect = 0.0
Identities = 642/655 (98%), Gaps = 5/655 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcccccaggactagctagaactacgtctcttgtgactcagacactgcctggtc 64
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 856 gaattcctcccccaggagtagctaga---acgtctcttgtgactcagacactgcctggtc 800
Query: 65 atctgcttcagtggcagacctgatttacaatgtctaccctagtacatttttgtggataga 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 799 atctgcttcagtggcagacctgacttacaatgtctaccctagtacatttttgtggataga 740
Query: 125 agatctttctgtccccccattgcacactggagaagctctgggtaccgagtgtggggaccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 739 agatctttctgtccccccattgcacactggagaagctctgggtaccgagtgtggggaacc 680
Query: 185 catggacagtaccataaggctccctgctgagccactatgcattgtggggtcagagctcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 catggacagtaccataaggctccctgctgagccactatgcattgtggggtcagagctcct 620
Query: 245 gtccctccttggtgactgggaatccctgctgtggttttgttggacaggcccaggtgactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtccctccttggtgactgggaatccctgctgtggttttgttggacaggcccaggtgactg 560
Query: 305 cttgccatccaaagccatcggtggaatgtctgtgggatcctttgccaaaaccccaaggca 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 559 cttgccatccaaagccatcggtggaatgtctgtgggattctttgccaaaaccccaaggca 500
Query: 365 aaatccaaggtccaaggccattgccaacagcttcccagttccctttcccataggaacttt 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 aaatccaaggtccaaggccattgccagcagcttcccagttccctttcccataggaacttt 440
Query: 425 tttgttgaaacctagctcccaacatgcttccaaaggccatgttctgtctttcctggatca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttgttgaaacctagctcccaacatgcttccaaaggccatgttctgtctttcctggatca 380
Query: 485 ctacagtgaagtatgacagttgtacagttttccaatctggccttgccttgctcggataaa 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 379 ctacagtgaagtatgacagttgtacagttttccaatctggccttggcttgctcgggtaaa 320
Query: 545 gctttgttatgtattttgtaaggcatacattctatattgtaatgtcctatgcaaaag--a 602
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 319 gctttgttatgtattttgtaaggcatagattctatattgtaatgtcctatgcaaaagaaa 260
Query: 603 aaaaaattaatgaaattgtaaattttattgctttgacatgtatgcatgtttagtg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaaaaattaatgaaattgtaaattttattgctttgacatgtatgcatgtttagtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_g05.g1 MSMg01no118_g05.g1 CHROMAT_FILE:
MSMg01no118_g05.g1 PHD_FILE: MSMg01no118_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:13 2005
(602 letters)
>mm_chr6_91277464_91278465
Length = 1002
Score = 1164 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus
Query: 1 acagcatttctgtcactccctcaggacgggatatgacatcccttatggccagtccccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcatttctgtcactccctcaggacgggatatgacatcccttatggccagtccccaac 260
Query: 61 tccagcagaaccccagtggccctcttatctgggtgcctatcccttggctgtcagtaccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagcagaaccccagtggccctcttatctgggtgcctatcccttggctgtcagtaccga 320
Query: 121 gtggggcttctctcataattgagaaggttgagtaaaccctcacgacttcaacatgttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggggcttctctcataattgagaaggttgagtaaaccctcacgacttcaacatgttagc 380
Query: 181 aggatgcagatcccagccctggatcttaaagacatccaggtacacccctgttcttgagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggatgcagatcccagccctggatcttaaagacatccaggtacacccctgttcttgagtg 440
Query: 241 gtcctcctagaagagtcaactgtactatctagggtgtctctgactgtccagttgtctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctcctagaagagtcaactgtactatctagggtgtctctgactgtccagttgtctgtg 500
Query: 301 ataacctttgcagcaatgcttcttagccctttgcagaagctcatatgggaaatccaagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataacctttgcagcaatgcttcttagccctttgcagaagctcatatgggaaatccaagtc 560
Query: 361 acagggactgagtgggccagggtgctgctgcgtgccttacatctcccagagagcccaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagggactgagtgggccagggtgctgctgcgtgccttacatctcccagagagcccaagg 620
Query: 421 accacagtcagatctgggaccagctagctccggcctatttccttacatgttgggtgtcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accacagtcagatctgggaccagctagctccggcctatttccttacatgttgggtgtcct 680
Query: 481 tagcctgttaaatgtctgggggcagggctttaatgttgctgtggctctgacagaatgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagcctgttaaatgtctgggggcagggctttaatgttgctgtggctctgacagaatgatt 740
Query: 541 tatcaccttgtaggtcaggggatggagatatctgcaaacatctacggaatgttaccagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatcaccttgtaggtcaggggatggagatatctgcaaacatctacggaatgttaccagtg 800
Query: 601 gt 602
||
Sbjct: 801 gt 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
