Query= MSMg01no120_c23.b1 MSMg01no120_c23.b1 CHROMAT_FILE:
MSMg01no120_c23.b1 PHD_FILE: MSMg01no120_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:33 2005
(418 letters)
>mm_chr6_101310156_101310973
Length = 818
Score = 785 bits (406), Expect = 0.0
Identities = 415/418 (99%)
Strand = Plus / Plus
Query: 1 cacatgtgcttctccagtttggtaagatttccacaaagatgatgggaatctgtgagctca 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacgtgcttctccagtttggtaagatttccacaaagatgatgggaatctgtgagctca 260
Query: 61 ttcctctggtttactaaagtgggaagggctgccgcccccacccagcatttaaaatgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctctggtttactaaagtgggaagggctgccgcccccacccagcatttaaaatgttgt 320
Query: 121 cccagacagatgacgttcatcattttatctactacatatcgtctctgacaaagctgtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccagacagatgacgttcatcattttatctactacatatcgtctctgacaaagctgtcag 380
Query: 181 tttttaaaaacaaaactttgcttttgaaactgtggttttggctaaaagctacagaaattc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttaaaaacaaaactttgtttttgaaactgtggttttggctaaaagctacagaaattc 440
Query: 241 caccataaatctcccgtcactccccttgagtgaaaacacggtgcagcgagtcgctgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccataaatctcccgtcactccccttgagtgaaaacacggtgcagcgagtcgctgccca 500
Query: 301 cactatttcagagcccagacccagcactggctgcatccctttttgatcacgtctctgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 cactatttcagagcccagacccagcactggctgcatccctttttgatcacgtctctgcac 560
Query: 361 atccctcaactcgaatcacttgattatgtcgagctgccccaaatcctgcccctgccct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atccctcaactcgaatcacttgattatgtcgagctgccccaaatcctgcccctgccct 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_c23.g1 MSMg01no120_c23.g1 CHROMAT_FILE:
MSMg01no120_c23.g1 PHD_FILE: MSMg01no120_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:33 2005
(420 letters)
>mm_chr6_101457329_101458147
Length = 819
Score = 781 bits (404), Expect = 0.0
Identities = 416/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 1 tccaaatgtctagtattttttagacaatttccacattgttgaattgcagagacttagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tccaaatgtctagtattttttagacaatttccacattgttgaattgcagagacttagctt 560
Query: 61 gtacaattgcttttaaaaaatggcaccagcctctatttaattaacagctggccaaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtacaattgcttttaaaaaatggcaccagcctctatttaattaacagctggccaaaatat 500
Query: 121 gacaaatatttctcacgctgattgtatgcttatgaacaatcaaggaacaaaagcaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gacaaatatttctcacgctgattgtatgcttatgaacaatcaaggaacaaaagcaaattg 440
Query: 181 atccaactgagcacagcgtcttgctcagttgctattgatacttttccctgactctgggag 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atccaactgagcacagcgttttgctcagttgctattgatacttttccctgactctgggag 380
Query: 241 tttgaagagagacccttcctactcagccatttttgtttgttccctgttaagtttttcagt 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 tttgaagagagacccttcctactcagcca-ttttgtttgttccctgttaagtttttcagt 321
Query: 301 aattttaaaacacagtttataaagaaactaatttaaaaatctaagtgtattcattttaga 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aattttaaaacacagtttaaaaagaaactaatttaaaaatctaagtgtattcattttaga 261
Query: 361 cggttaccaacttagtccttgtgcaaacataaagagctgcgaattttgggtccttctaaa 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 cggttaccaacttagtccttgtgcaaacataaagagctgtgaattttgggtccttctaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
