Query= MSMg01no121_e14.b1 MSMg01no121_e14.b1 CHROMAT_FILE:
MSMg01no121_e14.b1 PHD_FILE: MSMg01no121_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:01 2005
(289 letters)
>mm_chr6_99682977_99683664
Length = 688
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 aacgcatagctctgcacttttgaaatgaaaacaccacaattggcttcgcgccccaaaaca 60
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 312 aacgcatagctctgcacttttgaaatgaaaacaccacaattggctt-gtgccccaaaaca 254
Query: 61 aagaaacagaacaaaataaagctaggagtcataatgtgaaccctagttccctagcaagcc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aagaaacaaaacaaaataaagctaggagtcataatgtgaaccctagttccctagcaagcc 194
Query: 121 tcctgcctcagcttcctgaatgctgggatttcaagctaagagccaccacacctggttata 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 193 tcctgcctcagcttcctgaatgctgggatttcaagctaagagccaccacatctggttata 134
Query: 181 aaagttttgtacctattatttcatatgtatatgaatatgtcttgttacttcttctaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaagttttgtacctattatttcatatgtatatgaatatgtcttgttacttcttctaggtc 74
Query: 241 ctttccttctttaaatgttgctgaatgaggtttatttcgctgtgata 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ctttccttctttaaatgttgctgaatgaggtttatttcgctgtgata 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_e14.g1 MSMg01no121_e14.g1 CHROMAT_FILE:
MSMg01no121_e14.g1 PHD_FILE: MSMg01no121_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:01 2005
(285 letters)
>mm_chr6_99601084_99601768
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Plus
Query: 1 acagaactacagacttgctggggggcgggggtgtctcttgaacatccaatatcctgccaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 acagaactacagacttgctggggggcgggggtgtctcttgaacatcaaatatcctgccaa 260
Query: 61 atccatggtcatactcaagtcttcatggtgacccatggaggtggatgtcactgttgcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccatggtcatactcaagtcttcatggtgacccatggaggtggatgtcactgttgcacc 320
Query: 121 agttacacagaaactcaaggagacagagaagcagaatgtggttggcacatgtctttaaaa 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttacacagaagctcaaggagacagagaagcagaatgtggttggcacatgtctttaaaa 380
Query: 181 ccttcactatcagctctgcactcctcttgcctcccctgaagatcaatgaaagattttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttcactatcagctctgcactcctcttgcctcccctgaagatcaatgaaagattttgct 440
Query: 241 gatgaagtttcagctagggccagagaaagcctgcctctggggtag 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgaagtttcagctagggccagagaaagcctgcctctggggtag 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
