Query= MSMg01no121_j11.b1 MSMg01no121_j11.b1 CHROMAT_FILE:
MSMg01no121_j11.b1 PHD_FILE: MSMg01no121_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:25 2005
(161 letters)
>mm_chr6_86922399_86922959
Length = 561
Score = 296 bits (153), Expect = 5e-85
Identities = 159/161 (98%)
Strand = Plus / Plus
Query: 1 atacacccgagtacaaataataactaggattggaaacattggctaacctccacagcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacacccgagtacaaataataactaggattggaaacattggctaacctccacagcttcc 260
Query: 61 acaggagccctttagattaggattgcagagccaggaacacacgtggtagtgtgggaaatt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 acaggagccctttagattaggattgcagagccaggaacacatgtggtagtgtgggaaatt 320
Query: 121 cctgaaggttttcaagatacctgtttcctcattcttcatag 161
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cctgaaggttttcaagatacctatttcctcattcttcatag 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_j11.g1 MSMg01no121_j11.g1 CHROMAT_FILE:
MSMg01no121_j11.g1 PHD_FILE: MSMg01no121_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:25 2005
(287 letters)
>mm_chr6_87023302_87023987
Length = 686
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 caggttacccaggacagccagggttacacagagaaacccttagggacaaaaaggctcttg 60
||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 522 caggtcacccaggacagccagggttacacagagaaacccttaggga-aaaaaagctctcg 464
Query: 61 gggtaaaaaataaatattttgtgttgcagcaaataaaaaattattatcatcaactttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gggtaaaaaataaatattttgtgttgcagcaaataaaaaattattatcatcaactttgga 404
Query: 121 aattgatcttaaagtaagagacctacacaggccagggtttaacctgcctccttataaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aattgatcttaaagtaagagacctacacaggccagggtttaacctgcctccttataaagt 344
Query: 181 aactacagctaatgcaatttattaagaggccaacatgtcccagtttctttactgacaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aactacagctaatgcaatttattaagaggccaacatgtcccagtttctttactgacaacc 284
Query: 241 aacgtaagtccctttcacagatttcagcttttagaggttacta 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aacgtaagtccctttcacagatttcagcttttagaggttacta 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
