BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-123J15.T7 (MSMg01no123_j15.b1) | MSMg01-123J15.TJ (MSMg01no123_j15.g1) |
ACC | AG333165 | AG333166 |
length | 1,251 | 1,282 |
length of high quality (start - end) | 173 (96 - 268) | 280 (128 - 407) |
definition | CHROMAT_FILE: MSMg01no123_j15.b1 PHD_FILE: MSMg01no123_j15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:33 2005 | CHROMAT_FILE: MSMg01no123_j15.g1 PHD_FILE: MSMg01no123_j15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:33 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | CCCCCATCACTGCGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAAT
TCTCCTTTGTGAATAAAATGCATTACCAAGAGGCAAACCTTAGACAGAAA
CAATTATTTCTCATGCTCTGCCAGATTTTAACATGTGATATATGCTCGCA
TATATCTGTAGCATAAAGACGTGTGTGTGGGCCAGTTCAACCTTGATAAT
ATTCATCAGCTGACTTAGTAGGGAAAGAGGATGTGCTTAGTGTCATACAT
AATTGTGATGCTCTTCAGGGAAGAAGGGGTGAATAATGGCTTGATAAAGC
GCATTATCTTAGTATCTGCAACGGGAGGCACTGTTGAGGAGCATGACTTT
CTGTGCGATGCTCTCTGACCATTTTCCAGTCTACTCCGTCATTATAGGTA
AATGTTTTTTCTCGGCTATTTTACGGAGATGAACTTTTACAGTTTGTACT
CTGAGTTTTTTTTTTCCCCCCCCCTTAAATCCCCACCCCCCCCACAAAAA
AAAAGGGGTGTTTGGCCACAGGTCACAACTGTTCTGACAAATCATTATCC
TCGTTTCTTACCGCATATCTGATTGTTGATCTCATCAAGTTAGATCCTTC
ATCTGCTTCTTGTCCCACCCTCCTTACTTTGTCCAACACTCTCTCTCCCT
TGCTGTTCTGCTCAGCCCCTCCCTTCCTCTCATTTCGTTTTCCCATTCTG
ATTGTTTAGCTTCTTCCCCTCTTCCTCCCTTCCTTTCACTTCTCTCTCTT
CTTCTCTCCACCTCTCTATTACCCCCTTCTATCTTCATCCTCTCCTCCTC
CCTTATCTCACTCTTTTTTCTTCTTCATCTCTTTTCCCTCCTCTACCCTT
ACTTCTCTCCTTTCTCCTTCCCCTCTTCCTTTTCTCCTTCTCTCTTCTCC
TTTCTCCTACCTCTTACTCTCTCTTTCTTCTCTCTTTTCCTCTCCCCCTC
ACTCCTCTCTTCTCTTCTCCTTTCCTTTCCTCCCTCCATTCCCTTTCCTT
CTCTTTTTACCCTTTCCTTTCCTCTTCCTTCTCTCCATCCTCCCTCCTTT
TCTCCTTACTCCTCCTTCTCTCTTTCCACCTTCTGTCTCCTCACCCCTCT
CTTTTCTATTCTCACTCCTCTCTCTCCTCCCCTTTCTTCTCTCACTTATC
TCCTCTTCTTCTCCTTACTCTCCTCGCTACTTACTCTCTTCCTCTATTCC
TCTCTTCTTCCTACTCCCTCCCCTATTCCTCATCCTCCTTCCTTTCACTC
C
| ATTTCCNTTATGCATGGAGCCTGGGGXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCTTAAACCACCTCAGAGGNACTCAGAA
TGGTCCAAGGACCCCTTTAAATGCCTCTTTAATCAATACAAATGACTGTA
GAGAGGGACCTAGTTTTAATTGGCTTGAAAGCTTTCTCCTCTCACTGATT
TGAAAAAAAAAAAAAAAAGAAGTGAGATGTGTCCATTTATGTTGCGCTCA
CCTCGTCCGGCTAGGAAAAAACGCAACACGGTCGGATTCTTCTCAACAGC
TTTATTTCAGGAACACCTCGATGCTACAGGAACTCCGGGAACCCAAGGAG
GACTGCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGG
ATTGGTTTTTCTGCCGGCACTTTAATTTGTATGCACCTGCTCAGGAGGGG
TTGGCGCCTTATTCTCCCTACCACCTGCGCAGTGGCGTTGTTTACAAAAA
CGGTGTACCGGAGGCCGGCCCCATCTTTTAGGCGCCCGGCTGCCTCCACT
TTTACAACACGGGAATGCAGCTGATATCCCTGAAAGCAGAAAGACTGAAG
GCTCCTGGGTCTAACCACTCGGTATGCTAAGATACAAAGCAAGCACTATT
TCTCACTGTTCTGCTCTGTGACAATAAATGTCCTTCCTGCTTAAGCCCCT
TGAAGTTGCAATTCTGTTCACCTCAATCTTATCTGAATGTGTGTCGTAAC
AGCCTATATTACTACTCTAAAAAACCCCTACCCCTGTATTAACTCTTTTT
ATCCGTGCTACCACATCCAATAACTGTGTCTTTGTTGGTTCCCTCTTGAT
TATCTTGCTTTGTCCCCTTTCCATGCACCCTGATTTCAATTTAGGCATCC
TTTCCCTTAACTCGTTCAATATTCGCAACACAATCCGACCCCATTTTCCT
ACAAATGGACAATCTTCTTAACATAAGGTCAAAATATCTTCTCATATTCA
TTAAACTCCTATCTCTTTTTAAGTCCCAAATGCCTTAATATCCTTTCCTC
CTAGGAATTTATTTTTATTTCTCTACATTCAACATCTTTATATTATGTAA
ATTTCTTTCCTACTATTTATGTCATAAAAATCTTCTCTTTCTCTTATTTT
TATTTACTAAAACACAACATTTCCTGGCTTCTTATACTGTTCCTCTTCAA
TAATTTCCCTCCTCACCTCCTTTTAAACAATTGTTCTATAAACTACTCTC
TCCCTCCTACATCAATTATAGATTACGTCTCC
|
quality values | Open.Hide. 7 7 7 8 9 9 7 7 7 7 8 8 9 9 9 9 11 8 8 8 8 8 10 11 9 8 8 8 8 12 17 19 25 24 18 22 22 28 28 23 23 13 14 12 16 15 13 14 18 23
32 33 37 39 36 28 20 28 28 19 19 10 10 10 13 19 29 15 12 10 8 8 8 8 13 13 17 15 15 15 25 28 28 23 20 23 19 22 22 21 23 12 12 16 16 16 23 32 32 33
25 25 25 43 43 54 54 43 40 21 15 9 9 9 9 9 10 21 23 29 32 20 20 20 32 34 43 50 43 42 36 34 32 30 30 33 29 29 37 37 37 37 28 22 10 10 10 10 14 21
30 37 37 33 37 37 36 30 30 17 17 19 29 26 28 28 33 33 39 43 43 43 43 43 37 37 32 32 28 18 18 12 18 16 12 12 12 15 28 30 37 28 29 37 37 30 28 37 28 28
35 37 44 43 48 42 44 30 25 28 36 44 57 57 30 23 8 8 12 13 15 24 20 20 37 32 42 33 33 33 32 32 20 20 28 38 38 38 15 12 10 10 10 10 12 12 32 32 43 43
32 32 35 42 35 35 37 42 42 37 39 39 43 37 26 21 12 12 11 11 12 12 14 17 17 19 18 18 17 18 22 30 36 37 41 24 21 13 13 13 28 21 24 13 11 11 15 12 14 14
19 26 28 36 39 43 48 48 27 24 12 12 12 21 28 37 25 22 9 8 8 8 8 13 9 12 16 16 15 14 10 12 6 6 6 6 11 11 12 15 15 11 18 18 27 12 15 15 26 30
34 34 23 16 12 11 11 10 15 12 8 8 6 6 7 11 21 15 20 20 20 28 29 29 22 18 18 15 12 14 11 11 11 17 18 18 14 13 21 18 13 8 8 8 8 8 10 8 9 8
8 8 8 8 8 10 12 13 15 9 9 9 8 10 10 11 16 16 23 21 21 16 13 11 9 9 9 9 9 11 15 15 12 12 12 12 10 11 11 12 16 17 17 19 15 16 12 12 12 15
14 18 18 12 10 10 9 11 15 17 37 32 20 13 11 11 11 11 12 17 19 11 11 10 14 18 15 16 10 10 13 13 12 11 12 10 12 10 10 11 9 10 8 6 6 6 7 11 27 24
21 15 12 15 11 11 11 10 10 9 10 8 8 8 8 9 11 10 11 11 8 8 8 8 8 8 8 8 8 10 10 11 10 24 11 10 8 8 8 8 10 12 9 8 8 6 6 8 8 10
8 9 9 10 13 10 9 9 9 9 9 9 9 9 8 8 6 6 8 6 6 8 10 10 8 8 8 8 9 10 12 12 11 11 11 12 10 9 9 8 8 8 8 8 11 10 10 8 8 6
6 10 10 8 8 10 8 8 8 8 8 8 10 13 10 9 9 10 10 15 15 16 13 10 10 10 10 10 9 12 9 9 9 8 8 6 6 8 8 8 10 10 10 12 13 12 12 9 8 8
8 8 8 8 8 8 9 10 9 9 10 8 8 8 8 8 8 8 8 8 8 8 11 11 10 8 10 8 11 8 8 8 8 8 8 8 8 8 8 8 10 11 8 8 6 6 8 8 8 8
8 8 6 6 8 8 11 8 8 8 8 8 8 8 8 8 9 11 15 12 12 14 12 12 19 19 10 8 9 9 8 8 8 8 9 9 11 11 10 8 8 8 8 8 8 8 15 13 12 12
11 10 10 10 8 8 8 8 8 8 8 8 8 10 10 13 8 6 6 6 6 8 8 8 8 6 6 8 8 8 8 10 10 8 8 8 8 8 8 10 8 8 8 8 8 8 9 11 10 10
10 9 9 8 8 6 6 8 8 10 12 12 11 11 10 11 11 11 11 11 8 8 8 8 8 8 8 10 8 12 10 10 8 12 8 8 8 8 9 9 9 9 9 9 8 8 8 10 8 8
9 9 10 17 15 8 8 8 9 10 10 10 10 10 10 10 10 10 10 13 12 10 10 10 13 13 8 8 8 12 12 8 8 11 11 13 13 10 10 10 10 15 15 12 11 8 8 6 7 10
10 8 8 8 8 10 8 11 10 10 11 11 11 10 9 9 12 10 17 13 12 12 9 9 10 10 9 9 12 12 12 10 8 6 6 8 8 8 8 6 7 10 8 9 9 8 9 8 8 8
8 8 8 9 9 9 10 10 8 8 8 8 13 10 8 8 6 6 8 10 10 12 14 15 11 8 8 8 8 8 8 10 10 10 9 9 9 9 9 10 8 8 8 8 8 8 8 8 8 10
8 8 8 8 8 8 8 8 8 8 8 11 10 8 8 10 8 8 8 8 8 8 8 12 12 9 11 12 11 10 10 10 10 9 9 9 9 9 11 9 16 15 8 8 8 10 10 8 8 8
9 9 8 13 8 8 8 8 8 8 8 6 6 8 8 9 10 12 10 8 8 6 6 8 8 10 9 8 8 6 6 10 6 6 6 8 11 7 9 12 12 10 10 10 10 12 8 8 6 6
8 8 11 15 16 12 11 11 13 12 9 10 8 8 8 8 8 9 10 10 13 13 15 12 8 8 8 8 8 8 12 11 17 7 9 9 9 10 10 8 10 8 8 9 9 10 11 12 8 8
6 7 8 10 8 8 8 8 8 8 12 10 12 10 8 8 6 6 10 11 7 6 8 6 6 6 6 6 6 6 11 6 8 8 8 7 9 13 15 11 10 11 11 15 12 8 8 8 8 10
10 9 9 12 13 14 13 13 8 6 8 8 8 8 13 11 12 9 9 9 8 10 18 21 9 10 8 8 8 7 8 6 8 8 8 8 8 8 10 8 8 10 8 8 10 7 6 8 8 8
6 | Open.Hide. 8 8 10 8 8 3 0 3 8 6 6 6 8 6 7 8 8 8 8 7 7 9 9 7 7 10 10 11 15 15 9 9 7 7 13 15 19 10 10 15 23 14 15 8 13 14 25 28 35 35
24 29 33 24 24 33 35 42 38 38 47 47 48 48 41 46 41 34 23 13 9 9 9 12 10 9 9 9 9 8 8 8 8 8 12 13 21 23 23 23 3 0 3 21 21 33 33 37 37 39
41 41 53 44 44 39 50 37 37 33 25 16 11 11 17 9 8 8 8 9 10 10 13 13 13 15 14 21 18 27 30 39 53 53 42 42 42 30 19 17 19 19 21 30 35 57 57 43 43 43
43 43 47 47 57 54 48 48 46 41 46 39 46 46 41 42 47 47 47 41 57 47 47 47 47 57 57 57 57 57 57 59 57 35 32 39 39 39 39 39 37 40 37 47 48 57 57 57 57 54
57 57 54 54 57 59 59 68 68 59 59 59 54 54 54 57 57 52 52 52 52 52 52 52 52 50 59 52 52 52 52 52 52 52 52 52 57 57 54 59 59 59 57 52 52 52 57 57 57 57
57 57 57 57 52 54 57 44 38 24 12 12 22 38 43 57 57 57 57 57 52 52 52 52 57 57 37 43 43 43 43 52 52 52 50 52 57 52 54 52 59 52 43 43 43 43 52 52 43 43
43 57 57 68 68 57 57 57 52 52 52 46 43 43 43 43 43 43 37 43 43 57 57 57 50 43 39 37 37 44 43 42 42 35 32 24 18 13 13 24 32 39 44 43 44 46 42 42 37 37
37 41 44 44 43 43 43 46 46 54 46 44 37 30 30 32 39 36 32 31 31 23 28 32 37 34 42 32 32 32 42 37 30 30 39 40 47 39 47 35 32 32 39 39 48 47 47 37 28 28
28 28 28 18 18 9 10 10 11 10 11 11 12 12 12 21 19 31 31 39 39 43 43 43 43 47 39 39 30 30 30 40 39 37 37 30 33 37 43 43 39 39 39 30 30 29 37 28 28 28
15 20 11 11 11 12 11 11 11 11 11 11 10 10 10 10 10 10 12 11 11 13 15 19 26 28 32 28 23 23 23 21 15 14 14 12 17 10 12 10 10 18 22 15 18 16 16 14 21 13
10 8 8 8 10 12 14 28 24 17 17 18 18 12 18 18 12 12 13 13 15 24 28 23 28 28 42 23 34 23 18 16 18 18 23 28 28 29 15 15 12 24 17 18 13 11 10 13 18 41
41 42 33 28 25 25 25 28 29 18 12 11 19 12 21 21 21 15 11 11 11 14 19 23 21 17 16 13 13 13 22 21 17 14 11 10 10 10 10 9 12 11 11 11 12 12 22 17 14 12
12 11 8 10 8 8 10 10 10 8 8 10 8 8 8 8 8 10 12 15 12 13 13 24 21 18 18 13 13 10 10 10 10 13 13 19 18 12 12 11 10 8 10 8 8 8 11 22 23 20
20 19 16 13 10 10 10 10 11 19 24 16 19 19 16 15 15 19 8 8 8 9 13 14 14 28 23 17 16 9 9 9 9 15 15 15 15 15 19 22 24 15 12 11 9 8 8 8 8 12
15 14 9 10 11 10 9 15 15 15 10 10 10 10 10 14 14 13 10 9 10 14 8 8 8 8 8 12 12 16 20 26 25 20 15 19 17 15 17 15 21 12 11 11 11 11 11 12 12 12
10 10 8 8 8 8 8 8 10 10 14 10 9 9 10 9 10 8 8 9 9 11 12 12 12 8 8 10 12 10 11 10 9 10 10 8 8 8 8 8 8 10 10 10 10 10 19 18 21 6
6 6 6 12 12 11 10 10 9 10 9 9 10 12 11 8 8 6 6 8 8 6 7 10 8 8 8 8 8 8 8 8 11 10 10 10 10 8 8 7 6 8 8 8 8 8 10 8 8 8
9 9 10 10 13 12 10 12 10 19 15 15 13 10 11 8 8 10 10 9 9 8 8 6 6 8 10 11 10 9 9 10 10 10 10 10 10 8 8 8 9 9 10 8 8 6 6 8 8 10
8 6 6 7 10 12 21 21 8 8 6 6 8 8 8 8 8 8 8 10 10 11 11 8 8 8 8 8 8 10 10 9 10 10 10 9 10 11 12 12 8 8 8 8 8 12 10 8 8 8
8 6 6 8 8 8 8 10 10 8 8 6 6 8 8 6 7 10 8 8 8 6 6 8 8 10 11 12 12 15 11 8 8 8 10 10 10 11 11 11 8 8 8 6 6 8 8 8 8 8
8 9 10 10 8 8 8 8 9 9 11 11 11 11 11 10 10 10 10 8 8 11 11 11 17 20 11 10 8 10 8 8 8 7 8 8 8 8 8 10 10 11 19 8 8 8 8 8 8 10
6 8 6 6 8 6 6 6 8 8 8 8 10 14 15 11 11 10 15 10 8 8 8 6 6 6 8 8 8 8 8 8 8 11 11 13 11 11 10 10 10 9 8 8 8 8 8 9 9 9
10 8 8 6 9 8 10 8 8 9 9 11 11 11 10 10 9 6 8 6 6 8 8 10 10 10 12 8 10 8 8 7 7 14 8 9 12 10 10 6 6 8 8 8 6 6 8 8 16 12
11 15 13 12 8 8 8 8 8 8 8 8 10 8 6 6 8 8 8 8 8 10 9 9 8 8 8 8 11 10 10 9 9 12 12 6 6 8 6 7 8 8 8 8 8 10 8 11 10 10
8 10 10 8 8 10 10 10 10 10 10 13 10 9 9 9 16 8 8 8 10 11 8 12 12 9 9 10 10 10 10 9 9 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 10 10
8 8 8 8 10 10 10 10 10 10 8 10 7 9 12 13 8 8 9 8 6 6 6 7 7 8 6 6 10 8 8 8 |