Query= MSMg01no125_e07.b1 MSMg01no125_e07.b1 CHROMAT_FILE:
MSMg01no125_e07.b1 PHD_FILE: MSMg01no125_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:15 2005
(286 letters)
>mm_chr6_108257391_108258078
Length = 688
Score = 458 bits (237), Expect = e-133
Identities = 269/285 (94%), Gaps = 11/285 (3%)
Strand = Plus / Minus
Query: 5 gaattcatctgccc-aacacctgccagagcaggcaagcaggcac--------gcaggcac 55
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 551 gaattcatctgcccaaacacctgccagagcaggcaagcaggcacgcaggcaagcaggcac 492
Query: 56 gcaggcatgcacacacaatcgtgcaggtgggtcactccagtgtg--cctcccctggcttg 113
|||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 491 acaggcacgcacacacaatcgtgcaggtgggtcactccagtgtgccccccccctggcttg 432
Query: 114 ggtgggtgggtaatacatcctgacagcatggagctcagggtaattgtggtattgaacacg 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggtgggtgggtaatacatcctgacagcatggagctcagggtaattgtggtattgaacacg 372
Query: 174 cgcagtcttcccttctacatctctctccctctaccctagcaagctgccagatgtcactcc 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgcagtcttcccttctacatctctctccctctaccctagcaagctgccagatgtcactcc 312
Query: 234 tttgccagacaatgaactgctggggatttgggaaaagagggaagt 278
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 311 tttgccagacagtgaactgctggggatttgggaaaagagggaagt 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 688
Length adjustment: 9
Effective length of query: 277
Effective length of database: 679
Effective search space: 188083
Effective search space used: 188083
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no125_e07.g1 MSMg01no125_e07.g1 CHROMAT_FILE:
MSMg01no125_e07.g1 PHD_FILE: MSMg01no125_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:15 2005
(163 letters)
>mm_chr6_108095331_108095893
Length = 563
Score = 284 bits (147), Expect = 1e-81
Identities = 159/163 (97%)
Strand = Plus / Plus
Query: 1 aggtcactggccagtttcatgacttaaagattttccccatcaggattaggggtttagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcactggccagtttcatgacttaaagattttccccatcaggattaggggtttagctc 260
Query: 61 agtggaaaagtgtgtaaggtaaggtccgaggtttggtccccacaataggcagggaacagg 120
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 agtggaaaagtgtgtaaggtgaggtccgaggttttgtccccacaataggcagggaacagg 320
Query: 121 gagatatcgaaaaaagacaaagtctaaatataaaaacaaaaca 163
|||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 321 gagatatcgaaaaaagacaaagtcaaaatataaaagcaaaaca 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 563
Length adjustment: 8
Effective length of query: 155
Effective length of database: 555
Effective search space: 86025
Effective search space used: 86025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
