Query= MSMg01no125_o10.b1 MSMg01no125_o10.b1 CHROMAT_FILE:
MSMg01no125_o10.b1 PHD_FILE: MSMg01no125_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:05 2005
(563 letters)
>mm_chr6_86262067_86263028
Length = 962
Score = 988 bits (511), Expect = 0.0
Identities = 550/563 (97%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 1 caggatgtaatacatactacttcctccaactttcctccaataagtctctgtctcctacct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 caggatgtaatacatactacttcctccaactttcctccaatgagtctctgtctcctacct 260
Query: 61 ttcaccaattcacaattgtgcctccatgccatgaatccatcacgaggttaatctgcctat 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaccaattcacaattgtgcctccgtgccatgaatccatcacgaggttaatctgcctac 320
Query: 121 gaggtcttgggactctaatctctgaaaactccatcatagacacagccaaacatgtacatt 180
| ||||||||| ||| |||||||| |||||||||| ||||||||| |||||||||||||
Sbjct: 321 caagtcttggga-tctcatctctgagaactccatcacagacacagctaaacatgtacatt 379
Query: 181 tctaacctaatcatgaagatgaccaaagctaccaggaaaagtgtggcaggtggctctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctaacctaatcatgaagatgaccaaagctaccaggaaaagtgtggcaggtggctctgtg 439
Query: 241 gtgacagtagcatgtggccaggaccattcacattttcatatgtcagcagagcaggaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgacagtagcatgtggccaggaccattcacattttcatatgtcagcagagcaggaactg 499
Query: 301 gtgggcaggaagccttaggaactactttgaccctccaggccctgcccacaaaagccccgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgggcaggaagccttaggaactactttgaccctccaggccctgcccacaaaagccccgg 559
Query: 361 ccccaatgagtcctcaacttctgaagacagcaccaccagctttgatcaagtgttcaaaga 420
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 ccccaatgagtcctcaacttccgaagacagcaccaccagctttgatcaaatgttcaaaga 619
Query: 421 tgtgagccttcgcatgtggtagcattcgcattcaagccaaagcagctttctaaggtcaca 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 tgtgagccttcgcatgtggtagcattcgcattcaaaccaaagcagctttctaaggtcaca 679
Query: 481 ctaagatcttgacagggcttgatccctccagctctggtcaacaccctacattgatctctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctaagatcttgacagggcttgatccctccagctctggtcaacaccctacattgatctctg 739
Query: 541 gctatgctcatacctggctggct 563
|||||||||||||||||||||||
Sbjct: 740 gctatgctcatacctggctggct 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 962
Length adjustment: 10
Effective length of query: 553
Effective length of database: 952
Effective search space: 526456
Effective search space used: 526456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_o10.g1 MSMg01no125_o10.g1 CHROMAT_FILE:
MSMg01no125_o10.g1 PHD_FILE: MSMg01no125_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:05 2005
(573 letters)
>mm_chr6_86393274_86394247
Length = 974
Score = 1064 bits (550), Expect = 0.0
Identities = 568/574 (98%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 1 agtgtcagtcccagctacgaaggcaatcaaaggccaacctgggctacatgagaacctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtgtcagtcccagctacgaaggcaatcaaaggccaacctgggctacatgagaacctgtc 782
Query: 61 tcagaaaggaccagagcacaggaaagatgggttacttcacttctactggtcccttgaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcagaaaggaccagagcacaggaaagatgggttacttcacttctactggtcccttgaagc 722
Query: 121 acagcccagtccttcccagtcctacctgtaccagctgccaaggcacccggagaacagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acagcccagtccttcccagtcctacctgtaccagctgccaaggcacccggagaacagtgg 662
Query: 181 aagctgtgtctgtgagacctaacgcggttcattagcttgtgatgatcagacagcacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagctgtgtctgtgagacctaacgcggttcattagcttgtgatgatcagacagcacaaac 602
Query: 241 ccaggcatgctcatttgcagtgaggtgtgccacttggcctaagtcctctgaaggctgagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaggcatgctcatttgcagtgaggtgtgccacttggcctaagtcctctgaaggctgagt 542
Query: 301 tctgatgtaacattgcagacattccatcccc-tctagcaaagctcttgctcagggttcca 359
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 541 tctgatgtaacattgcagacattccatccccttctagcaaagctcttgctcagggttcca 482
Query: 360 gattccaactcctctaggtagagctcttggcagcctatagcaaaacaagaggacagttgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattccaactcctctaggtagagctcttggcagcctatagcaaaacaagaggacagttgt 422
Query: 420 catatggcagagatggatctttctactgagaaacaggcagagtaggagctgggctagctc 479
||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 421 catatggcaaagatggatctttctacttagaaacaggcagagtaggaactgggctagctc 362
Query: 480 attagctgacaactgcttagtccatgggaagtccccggggccagtctacagtgccagaac 539
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attagctgacgactgcttagtccatgggaagtccccggggccagtctacagtgccagaac 302
Query: 540 atcaatgcacgcaaaggccccatggggtctatgt 573
||||||||||||||||||||||||||||||||||
Sbjct: 301 atcaatgcacgcaaaggccccatggggtctatgt 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 974
Length adjustment: 10
Effective length of query: 563
Effective length of database: 964
Effective search space: 542732
Effective search space used: 542732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
