Query= MSMg01no126_i10.b1 MSMg01no126_i10.b1 CHROMAT_FILE:
MSMg01no126_i10.b1 PHD_FILE: MSMg01no126_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:57 2005
(202 letters)
>mm_chr6_94075851_94076452
Length = 602
Score = 275 bits (142), Expect = 2e-78
Identities = 179/198 (90%), Gaps = 14/198 (7%)
Strand = Plus / Plus
Query: 1 cacatgcgcatgcacacaggcagcacacatgtgtgcatgcgcaagcacacacacacacac 60
|||||| ||| |||||||||||||||||||||| | |||| ||||||||||||||||
Sbjct: 215 cacatgtgcacgcacacaggcagcacacatgtg--c--gcgc--gcacacacacacacac 268
Query: 61 acacacacacacacacacatttttcatttttgaaagcttggaaaacatatctatcacaag 120
||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 269 acacacacaca--------tttttcatttttgaaagcttggaaaacatatctatcagaag 320
Query: 121 aaaaaactgcatgctttctgtcacaaaggaagagggatgactgacagggatgcagctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aaaaaactgcatgctttctgtcacaaaggaagagggatgactgacagggatgcagctaag 380
Query: 181 caaaggctgaatattttg 198
||||||||||||||||||
Sbjct: 381 caaaggctgaatattttg 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no126_i10.g1 MSMg01no126_i10.g1 CHROMAT_FILE:
MSMg01no126_i10.g1 PHD_FILE: MSMg01no126_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:57 2005
(342 letters)
>mm_chr6_94226839_94227580
Length = 742
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 1 tgtgcagaccaggccgcccttgaactcactgaggtttctctgccttagccttctgagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgtgcagaccaggccgcccttgaactcactgaggtttctctgccttagccttctgagtgc 563
Query: 61 ttggattaatggtgagggccacaatgatggtctcatgtaagtctgcagctagattagctc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttggattaatggtga-ggccacaatgatggtctcatgtaagtctgcagctagattagctc 504
Query: 121 tagtgtctgtctctctttcctctgtctgcctccttatccttccttctatagaatcgcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 503 tagtgtctgtctctctttcctctgtctgcctccttatccttccttctatagaattgcaat 444
Query: 181 gctttcaactttctacccaacagtttttccaattagcagacacccagtgcctattaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gctttcaactttctacccaacagtttttccaattagcagacacccagtgcctattaatct 384
Query: 241 cttctgggctgtaatggttgtcaaagcctaatgagttagcttcaagtacttctgcctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttctgggctgtaatggttgtcaaagcctaatgagttagcttcaagtacttctgcctgtt 324
Query: 301 gatgagtaacttaagttcagctagtctgtctgtaaacttca 341
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacgagtaacttaagttcagctagtctgtctgtaaacttca 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
