Query= MSMg01no126_m24.b1 MSMg01no126_m24.b1 CHROMAT_FILE:
MSMg01no126_m24.b1 PHD_FILE: MSMg01no126_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:20 2005
(422 letters)
>mm_chr6_148299962_148300783
Length = 822
Score = 750 bits (388), Expect = 0.0
Identities = 412/420 (98%), Gaps = 2/420 (0%)
Strand = Plus / Plus
Query: 4 gaattcaccatggactc-tcaagggcatgcaatgaatagactgtgcacatgtaaggatgc 62
||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 gaattcaccatggacacat-aagggcatgcaatgaatagactgtgcacatgcaaggatgc 262
Query: 63 gggctggggaggagctactgaggtactgaggtggcccatgctagttcatcaatctgtgtg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gggctggggaggagctactgaggtactgaggtggcccatgctagttcatcaatctgtgtg 322
Query: 123 ctcagatgcccactgacttttgtgaggaaggggaaccttttcctaatgcactcaaaatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcagatgcccactgacttttgtgaggaaggggaaccttttcctaatgcactcaaaatat 382
Query: 183 gctaaaggacctatgatggacctaaacatcatgtggcacccatgcctcatggttgcagct 242
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttaaaggacctatgatggacctaaacatcatgtggcacccatgcctcatggttgcagct 442
Query: 243 tgctcctttatgaagagatgcttatatgtagcagaggccctggtctcttactggttaata 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 tgctcctttatgaagagatgcttatatgtagcagaggccctggcctcttactggttaata 502
Query: 303 ctcctggtgtagtaatgactttttacacacagacttgtttactctagctttcatcctctt 362
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 ctcctgatgtagtaatgactttttacacagagacttgtttactctagctttcatcctctt 562
Query: 363 agaaccagctttcatttgctgaagagactagtatcacatgccatcactaaatttccagtc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agaaccagctttcatttgctgaagagactagtatcacatgccatcactaaatttccagtc 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_m24.g1 MSMg01no126_m24.g1 CHROMAT_FILE:
MSMg01no126_m24.g1 PHD_FILE: MSMg01no126_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:20 2005
(210 letters)
>mm_chr6_148433775_148434384
Length = 610
Score = 389 bits (201), Expect = e-113
Identities = 207/209 (99%)
Strand = Plus / Minus
Query: 1 cacagcttcagagccaaattttgttcggtcatttctcacttccttaatgcccacccactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cacagcttcagagccaaattttgttcggtcatttctcacttccttaatgcccacccactg 305
Query: 61 cccatctgtgtcagacacccacctgtgtcagacctagcatcttggtgactcgcagttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cccatctgtgtcagacacccacctgtgtcagacctagcatcttggtgactcgcagttaaa 245
Query: 121 ccttctagaacatgttaacttataagaccgatagcttttaccaagtcatttcctgtgggt 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 244 ccttctagaacatgttaacttagaagaccgatagcttttaccaagtcatttcctgtgggc 185
Query: 181 ctatggcagccattttcattcagaccagc 209
|||||||||||||||||||||||||||||
Sbjct: 184 ctatggcagccattttcattcagaccagc 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
