Query= MSMg01no131_i08.b1 MSMg01no131_i08.b1 CHROMAT_FILE:
MSMg01no131_i08.b1 PHD_FILE: MSMg01no131_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:46 2005
(284 letters)
>mm_chr6_16648968_16649651
Length = 684
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%)
Strand = Plus / Plus
Query: 1 aaatggaccttttgtactcccacatctgggaagaaaattagtaaggctagcaagacaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatggaccttttgtactcccacatctgggaagaaaattagtaaggctagcaagacaagc 260
Query: 61 ttgctatcgcttttgcttctgctgtcacttgtgttgtctttggttgcctgggccaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ttgctatcgcttttgcttctgctgtcacttgtgttgtctttggttgcctaggccaagctt 320
Query: 121 gagttaatgtgtggaggacatggagcaaagctgacaccactgcttgttggctgtagaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagttaatgtgtggaggacatggagcaaagctgacaccactgcttgttggctgtagaggt 380
Query: 181 gtgtccgtgcacacacgtgaagtcagccacacatagctaattagctaaatgacttcatga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtccgtgcacacacgtgaagtcagccacacatagctaattagctaaatgacttcatgc 440
Query: 241 tgctgcatccaacactaagttgaactatcaagatggagttttga 284
|||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 441 tgctgcatccaacactaagttgtactgtcaagatagagttttga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_i08.g1 MSMg01no131_i08.g1 CHROMAT_FILE:
MSMg01no131_i08.g1 PHD_FILE: MSMg01no131_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:46 2005
(286 letters)
>mm_chr6_16748238_16748922
Length = 685
Score = 429 bits (222), Expect = e-125
Identities = 270/286 (94%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 ctctgcagtttagtgctgtatttctagcctgatgacatatcataattttcctacttatca 60
|||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||
Sbjct: 485 ctctgcagtttagtgctgtatttctagcctgacgacatatcataa-tttactatttatca 427
Query: 61 tcaatgttgtttaaaggaatcttaaaagatgtctaccattaaagtatatgtatgggaaga 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 426 tcaatgttgtttaaaggaatcttaaaagatgtctacaattaaagtatatgtatgggaaga 367
Query: 121 tgaactaaaagcagccacttgacaaacaaagggaaccaatctcagaaatgcattagtcaa 180
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 366 tgaactaaaagcagccacatgacaaacaaagggaaccaatctcggaaatgcattagtcaa 307
Query: 181 atagactactctgcaatctatagactagccttttttaaacctgtactctgatacctttgt 240
|| ||||||||||||||| | |||| |||||||||| ||||||||||| |||||||||||
Sbjct: 306 atggactactctgcaatccagagacaagcctttttttaacctgtactcagatacctttgt 247
Query: 241 agtctagcacccattactttttgagattttattttttcctaaaagt 286
||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 246 agtctagcacccaggacgttttgagattttattttttcctaaaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
