Query= MSMg01no132_e05.b1 MSMg01no132_e05.b1 CHROMAT_FILE:
MSMg01no132_e05.b1 PHD_FILE: MSMg01no132_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:44 2005
(565 letters)
>mm_chr6_136757862_136758826
Length = 965
Score = 1093 bits (565), Expect = 0.0
Identities = 565/565 (100%)
Strand = Plus / Minus
Query: 1 aaacagtagaaaatcaaacactgtcaagacacagatttgtaatatattctttatttgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aaacagtagaaaatcaaacactgtcaagacacagatttgtaatatattctttatttgtcc 706
Query: 61 tttttgctgtcttcagaaaccatgggggggggaccacgtgttcgggacagtgagacctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tttttgctgtcttcagaaaccatgggggggggaccacgtgttcgggacagtgagacctag 646
Query: 121 ctggcctcattcacagctgtaccctcagttactagcacgtggtgtagacgtcataccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctggcctcattcacagctgtaccctcagttactagcacgtggtgtagacgtcataccaat 586
Query: 181 actgggaatgaaataaatttcgaggggaaatactgcaaatgaagaggaagacttgaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 actgggaatgaaataaatttcgaggggaaatactgcaaatgaagaggaagacttgaactc 526
Query: 241 tgactcccccccgggggtggaggggaagaacccagagtgaaacctccgtagcatgggatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgactcccccccgggggtggaggggaagaacccagagtgaaacctccgtagcatgggatg 466
Query: 301 ttttgtggctcctgctaacagaatgatggttactgagtgagcaggaaacggaatgaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttttgtggctcctgctaacagaatgatggttactgagtgagcaggaaacggaatgaccaa 406
Query: 361 ggcaagaatcgcatttccagggccctggggtttggctctccgcgttacgttaactcacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggcaagaatcgcatttccagggccctggggtttggctctccgcgttacgttaactcacac 346
Query: 421 gaccctttccttccttgaggcgccatcacccaactcaacagttacggaaaagaagaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaccctttccttccttgaggcgccatcacccaactcaacagttacggaaaagaagaaacc 286
Query: 481 tgatcccaggaaagctaacagtcacccctaaaaaaaaaaaaaaaaaatcggttttgcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgatcccaggaaagctaacagtcacccctaaaaaaaaaaaaaaaaaatcggttttgcttt 226
Query: 541 taagtaaaatcaggctgattctcag 565
|||||||||||||||||||||||||
Sbjct: 225 taagtaaaatcaggctgattctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_e05.g1 MSMg01no132_e05.g1 CHROMAT_FILE:
MSMg01no132_e05.g1 PHD_FILE: MSMg01no132_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:44 2005
(587 letters)
>mm_chr6_136604713_136605699
Length = 987
Score = 1112 bits (575), Expect = 0.0
Identities = 584/587 (99%), Gaps = 1/587 (0%)
Strand = Plus / Plus
Query: 1 ctcagcttccctagtcagtttctacaggaagttgtgagtgctaagacggaggatgctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagcttccctagtcagtttctacaggaagttgtgagtgctaagacggaggatgctgcc 260
Query: 61 tctcagttattggtcttttgcctggaaggctcgctgccctgactccttcctagaaacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcagttattggtcttttgcctggaaggctcgctgccctgactccttcctagaaacact 320
Query: 121 agctggtgctttaatggggatcttccagtcggtttccgctggatgattgagcacccgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctggtgctttaatggggatcttccagtcggtttccgctggatgattgagcacccgata 380
Query: 181 tgatgatgagcacccctttcattactcaataacacattcaaaactgaaaatatgactgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatgatgagcacccctttcattactcaataacacattcaaaactgaaaatatgactgtt 440
Query: 241 gtagatcatttgtcagacggtacaaaacagttaccttagaaagaaaatcttttttttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagatcatttgtcagacggtacaaaacagttaccttagaaagaaaatcttttttttttt 500
Query: 301 tttttttttgagacagggtttctctgtgtagccctggttgtcctacaactcactctgtag 360
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tttttttt-gagacagggtttctctgtgtagccctggttgtcctagaactcactctgtag 559
Query: 361 accaggctggcctcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accaggctggcctcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggtgt 619
Query: 421 gcgccaccactgccccactaggaagaaattcttaattaagatggaggacttccaatggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcgccaccactgccccactaggaagaaattcttaattaagatggaggacttccaatggct 679
Query: 481 tttatatttttaacatgaaaacaaaacaataaaacctcagatgtcctcattatatttctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttatatttttaacatgaaaacaaaacaataaaacctcagatgtcctcattatatttctt 739
Query: 541 gtgcactttattattctttgggaacttatattcaattttaaaaactc 587
|||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 740 gtgcactttattattctttgtgaacttatattcaattttaaaaactc 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
