ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACCTGAGGAATACTGAATGGCAAAGAAGCACCGGAAAAATGTTCAA
CATCCTTAATCATCTTGGACCTGCAAATCAAAACAACACTGAGATTCCAC
TTCACTCCAGTCAGAATGGCTAAGATCAAAACCTCAGATGACAGCAGATG
CTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCATTGTTGGTGGGATT
GCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAA
TTGGACGTTATACTACCGGAGGATCCCGCAATACCTCTCCTGGGCATATA
TCCAGATGATGTCCCCCCCGCCCCCCCCAACACATGCTCCACTATGTTCA
TAGCAGCCTTGTTTATAATAAACAGAAACTGGAAAGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAATA
CTACTCTTTTAAAAAAAAATAAATTTATGAAATTCCTAGGCAAATGGATG
GACCTGGAGGGTATCATCCTGAGTGAAGTAACCCAATCACAAAGGAACTC
GAACAATATGTACTCACTGATAAGTGGATAATAGCCCAGAAACTTAGGAT
ACCCAAGATATAAGATACAACTTGCCAAATGCATGAAATTCAAGAAGAC

GATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGAATCTCTTTGAGTCACATTCTCAACCT
TCATGTTTTCCTCCTCTCAAGGCTGCTCAATATACTTTATTTCTGCCTTT
CTAACTCCAGAAGGTTATTAGACGATAATGAATTTATATAAGTGAATATT
CTCTGTGACCAGTGAAGAACTAGAGAAGTAGAAGTTAAATTTTTATGAGC
TTATATTGCAGAAGTGCTGCTGTGATTCAACACAGATATATAAATTCATC
TCATAGGATCTTAGAACCACAAGGTATATTTGAGGATCATTGCTCCCTGG
CTTTGTTCTCAAATAGGTGAGAGCTGAAATTTCCTGTCTTCTCAAAAGCA
GCCAGGCTAGATAGCTTTGTGCATTATTACTGTGATGGCCAAAAGTTCAA
CTGATGAATATTTAAGAAGAAAATCTCAGTAAATGGATGCTTATTTCACA
ATGACTTTGCCAGTAAGTTACTTTTCTATTGTTCCTAACAATACCCATGA
TCTGATGGATTTGAACAAACATTCAAGGTATCCCCAGTTTACCCAAAAGA
TATGATTCACACTGAGATGAGTTCAGTGTATGCTACTCAGATCAGCCTAG
CTGGTGTAGCTNATTAGCAGTCTCACAGTTCAGAGGN

Query= MSMg01no132_l16.g1 MSMg01no132_l16.g1 CHROMAT_FILE:
MSMg01no132_l16.g1 PHD_FILE: MSMg01no132_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:20 2005
         (581 letters)



>mm_chr6_108957673_108958655
          Length = 983

 Score = 1081 bits (559), Expect = 0.0
 Identities = 577/583 (98%), Gaps = 2/583 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaatctctttgagtca-cattctcaaccttcatgttttcctcctctcaaggctgctcaa 59
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaatctctttgagtcaacattctcaaccttcatgttttcctcctctcaaggctgctcaa 260

                                                                       
Query: 60  tatactttatttctgcctttctaactccagaaggttattagacgataatgaatttatata 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatactttatttctgcctttctaactccagaaggttattagacgataatgaatttatata 320

                                                                       
Query: 120 agtgaatattctctgtgaccagtgaagaactagagaagtagaagttaaatttttatgagc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgaatattctctgtgaccagtgaagaactagagaagtagaagttaaatttttatgagc 380

                                                                       
Query: 180 ttatattgcagaagtgctgctgtgattcaacacagatatataaattcatctcataggatc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatattgcagaagtgctgctgtgattcaacacagatatataaattcatctcataggatc 440

                                                                       
Query: 240 ttagaaccacaaggtatatttgaggatcattgctccctggctttgttctcaaataggtga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagaaccacaaggtatatttgaggatcattgctccctggctttgttctcaaataggtga 500

                                                                       
Query: 300 gagctgaaatttcctgtcttctcaaaagcagccaggctagatagctttgtgcattattac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagctgaaatttcctgtcttctcaaaagcagccaggctagatagctttgtgcattattac 560

                                                                       
Query: 360 tgtgatggccaaaagttcaactgatgaatatttaagaagaaaatctcagtaaatggatgc 419
           ||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 561 tgtgatggctaaaagttcaactgatgaatatctaagaagaaaatctcagtcaatggatgc 620

                                                                       
Query: 420 ttatttcacaatgactttgccagtaagttacttttctattgttcctaacaataccc-atg 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 ttatttcacaatgactttgccagtaagttacttttctattgttcctaacaataccccatg 680

                                                                       
Query: 479 atctgatggatttgaacaaacattcaaggtatccccagtttacccaaaagatatgattca 538
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atctgatggatctgaacaaacattcaaggtatccccagtttacccaaaagatatgattca 740

                                                      
Query: 539 cactgagatgagttcagtgtatgctactcagatcagcctagct 581
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cactgagatgagttcagtgtatgctactcagatcagcctagct 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 983
Length adjustment: 10
Effective length of query: 571
Effective length of database: 973
Effective search space:   555583
Effective search space used:   555583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)