Query= MSMg01no135_g18.b1 MSMg01no135_g18.b1 CHROMAT_FILE:
MSMg01no135_g18.b1 PHD_FILE: MSMg01no135_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:33 2005
(602 letters)
>mm_chr6_118818029_118819026
Length = 998
Score = 1077 bits (557), Expect = 0.0
Identities = 587/599 (97%), Gaps = 6/599 (1%)
Strand = Plus / Plus
Query: 5 gaattcaattccttccc-gtttattgagtgtccagataaatgcaatgtcttctcctggtt 63
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattcc-gccctgtttattgagtgtccagataaatgcaatgtcttctcctggtt 263
Query: 64 cctggggagtgggttaggaaggagtgcagcagtgggctagagcaagacaccctcaagatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctggggagtgggttaggaaggagtgcagcagtgggctagagcaagacaccctcaagatg 323
Query: 124 ggtttcctatcctagctgcttagtcccctttgaaaacaatgcctcccttcttggggtttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtttcctatcctagctgcttagtcccctttgaaaacaatgcctcccttcttggggtttt 383
Query: 184 ccaccatgactgcaaccaccctggggacctggcttgctggtgagcaactcttccagagaa 243
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 384 ccaccatgattgcaaccaccctggggacctggcttgctg----gcaactcttccagaaaa 439
Query: 244 agcttcagcccatcctaagttgaagtagtgactggagagtatccctgagacactgaagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcttcagcccatcctaagttgaagtagtgactggagagtatccctgagacactgaagga 499
Query: 304 agcaaccccagtctccacacctgctcagcctggactgctggagaaggtacaggcagaaga 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcaaccctagtctccacacctgctcagcctggactgctggagaaggtacaggcagaaga 559
Query: 364 gtagagatacaccgtgccgtgtcctaaggattggaggcaatctggcaatttagctgtgcc 423
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 gtagagatacaccgtgccgtgtcctaaggattggaggcattctggcaatttagctgtgcc 619
Query: 424 acacactcaaaagaaaggttcccacagctcaagagtttctggaaaacagattccacataa 483
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acacactcaacagaaaggttcccacagctcaagagtttctggaaaacagattccacataa 679
Query: 484 tctcgcacaacccctaccacacttcagaggcaagcccctgagaagtcattttcccccagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tctcgcacaacccctaccacacttcagaggcaagcccctgagaagtcattttcccccagc 739
Query: 544 ccctcacctgagagggctaacccatgtctgtgtctaaccccagacactcttcctccaaa 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccctcacctgagagggctaacccatgtctgtgtctaaccccagacactcttcctccaaa 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 998
Length adjustment: 10
Effective length of query: 592
Effective length of database: 988
Effective search space: 584896
Effective search space used: 584896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_g18.g1 MSMg01no135_g18.g1 CHROMAT_FILE:
MSMg01no135_g18.g1 PHD_FILE: MSMg01no135_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:33 2005
(240 letters)
>mm_chr6_118970679_118971318
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 1 acctggcttttgcttcacagctctggtgtcactgttggtgtctgtgccatgacacagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acctggcttttgcttcacagctctggtgtcactgttggtgtctgtgccatgacacagtag 381
Query: 61 tatgaactgcttccttcagtcctactggagaatatggccctgttggaacttggaatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatgaactgcttccttcagtcctactggagaatatggccctgttggaacttggaatgctc 321
Query: 121 agtagtgattctttatactacgatgttggaattggagagggagggatgtgttcccctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtagtgattctttatactacgatgttggaattggagagggagggatgtgttcccctctg 261
Query: 181 gtccctggagaaccccaggcagtactcatggtagtagcaaggcctatccatttattggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtccctggagaaccccaggcagtactcatggtagtagcaaggcctatccatttattggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
