Query= MSMg01no136_d10.b1 MSMg01no136_d10.b1 CHROMAT_FILE:
MSMg01no136_d10.b1 PHD_FILE: MSMg01no136_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:31 2005
(654 letters)
>mm_chr6_106629049_106630102
Length = 1054
Score = 1230 bits (636), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Minus
Query: 11 gaattccatatgacgtttccagggggttggcttggtgctataaaaaaaaaattaagatag 70
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gaattccatatgatgtttccagggggttggcttggtgctataaaaaaaaaattaagatag 795
Query: 71 acgaagtcacagattattaaatctcaatggattccaaggaatatccccttactagaattc 130
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 794 acgaagtcacagattattaaatctcaatggattccgaggaatatccccttactagaattc 735
Query: 131 gagagtagaggcaatttaatgggcgattgcactaatatgtgtcttcaaggtcactgaaat 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gagagtagaggcaatttaatgggcgattgcactaatatgtgtcttcaaggtcactgaaat 675
Query: 191 ctgacgagatacagcattgcaaatggaaaaagattcagttggtcgcctaccatttatagc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctgacgagatacagcattgcaaatggaaaaagattcagttggtcgcctaccatttatagc 615
Query: 251 taaaagaagtagtccttctcagtgaggagagaaacatttatctttctgtcctctggagca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 taaaagaagtagtccttctcagtgaggagagaaacatttatctttctgtcctctggagca 555
Query: 311 atgaatttggcatgctattctgaaaggttcagttaaaatgctaaggtgcatttgaatcca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atgaatttggcatgctattctgaaaggttcagttaaaatgctaaggtgcatttgaatcca 495
Query: 371 tataatgataccaattagtatgcaaatgatccctgggaggtggggataggtaatgaactt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tataatgataccaattagtatgcaaatgatccctgggaggtggggataggtaatgaactt 435
Query: 431 ggagtatgtttgatgaatccccaaaatatttctgaacaactctgtccttacgtggctttc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggagtatgtttgatgaatccccaaaatatttctgaacaactctgtccttacgtggctttc 375
Query: 491 tggtcgtgacattgactgttgcactggagggtcctgtcccagctgagttatacgccttga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tggtcgtgacattgactgttgcactggagggtcctgtcccagctgagttatacgccttga 315
Query: 551 cagataagtgatacagagcacttcctttcaagttggtgatttttgtggatgtctgatttc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cagataagtgatacagagcacttcctttcaagttggtgatttttgtggatgtctgatttc 255
Query: 611 caactgttcgtatctttttagcattttcttccttgtcatcatgt 654
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 caactgttcgtatctttttagcattttcttccttgtcatcatgt 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_d10.g1 MSMg01no136_d10.g1 CHROMAT_FILE:
MSMg01no136_d10.g1 PHD_FILE: MSMg01no136_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:31 2005
(474 letters)
>mm_chr6_106459245_106460118
Length = 874
Score = 822 bits (425), Expect = 0.0
Identities = 452/461 (98%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 1 tggaaattcccaaatttcagcaagaagatgccggttcatatgaatgtgtggctgaaaact 60
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaaattcccaattttcagcaggaagatgccggttcatatgaatgtgtggctgaaaact 260
Query: 61 ccagaggcaaaaacgtagccaagggacagttgactttttatggtaagttttcagtta-ta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 261 ccagaggcaaaaacgtagccaagggacagttgactttttatggtaagttttca-ttaata 319
Query: 120 cttatggttatgctacagaacttttcgtattaggatcatctactggcagatctgcagtag 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 320 cttatggttatgctacagaactttttgtattaggatcatctactggcagatctgcagtag 379
Query: 180 gagattttcttctaaggaatcatatagaataggactgaaccagactcacttttctacata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagattttcttctaaggaatcatatagaataggactgaaccagactcacttttctacata 439
Query: 240 attagcatgccctagatgactctgggtgtggaaagtagaggtgggggcaaggatgttgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attagcatgccctagatgactctgggtgtggaaagtagaggtgggggcaaggatgttgaa 499
Query: 300 ggagcagagaggaaggaattaagctgatgtgttttagacacggacgatagtgtgaacaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggagcagagaggaaggaattaagctgatgtgttttagacacggacgatagtgtgaacaca 559
Query: 360 ctcccaaaggagacagttttcctgttttcctcttcccattgagctatcaacctgacactg 419
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 560 ctcccaaaggagatagttttcctgttttcctcttcccattgagctatcagcctgacaccg 619
Query: 420 gaagtaagtttggtgtgtatgtgtgtgtgtgtgtgtgtgcg 460
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 gaagtaagtttggtgtgtgtgtgtgtgtgtgtgtgtgtgcg 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
