Query= MSMg01no141_h11.b1 MSMg01no141_h11.b1 CHROMAT_FILE:
MSMg01no141_h11.b1 PHD_FILE: MSMg01no141_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:53 2005
(630 letters)
>mm_chr6_137588245_137589273
Length = 1029
Score = 1172 bits (606), Expect = 0.0
Identities = 624/634 (98%), Gaps = 9/634 (1%)
Strand = Plus / Minus
Query: 1 ttgttgaaaattgtttttaatacaagag----aaccctatagcttaaggaaaacataatg 56
|||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 629 ttgttgaaaattgtttttaatacaagagaagaaa----atagcttaaggaaaaaataatg 574
Query: 57 atcaacagaagtttatacttaaaagagaaagaaaaccatcttaaagtctcttacagaagg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atcaacagaagtttatacttaaaagagaaagaaaaccatcttaaagtctcttacagaagg 514
Query: 117 ctgcctgtatttaggtttagtttgaaaatgttgtatgtaccattagaatattgtttaggc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctgcctgtatttaggtttagtttgaaaatgttgtatgtaccattagaatattgtttaggc 454
Query: 177 tgatctttaatctcaaaatatgtgcatattcttggttatctgtgggcctaatggaacagt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgatctttaatctcaaaatatgtgcatattcttggttatctgtgggcctaatggaacagt 394
Query: 237 gtttccggtgttggaacacacgtgcagtcattaaacactggactctttctggattgctct 296
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 393 gtttccggtgttggaacacacgtgcagtcattaaacactggactctttct-gattgctct 335
Query: 297 agcagttatatttggtaacattgtaattgttgttagtattttctttagagattaggaagt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agcagttatatttggtaacattgtaattgttgttagtattttctttagagattaggaagt 275
Query: 357 tgaaaacggtttaggaaaaagaataaggatgtgaggggaaataactgtaagtctgtctgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgaaaacggtttaggaaaaagaataaggatgtgaggggaaataactgtaagtctgtctgt 215
Query: 417 ctctttgaaagtactgtgtgtgtgtgtgtgtgtgtgtttctttgtttttgtttttcaagt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctctttgaaagtactgtgtgtgtgtgtgtgtgtgtgtttctttgtttttgtttttcaagt 155
Query: 477 cagggttactttgtttagtcctagctgtcctagaatgagctatgtagatcaggctggcca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cagggttactttgtttagtcctagctgtcctagaatgagctatgtagatcaggctggcca 95
Query: 537 tgaactcagaactcagagatcctcctcctgcctctccagtgcactaccaccttcacccag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgaactcagaactcagagatcctcctcctgcctctccagtgcactaccaccttcacccag 35
Query: 597 ctacttttaatatatattattccagttctctcta 630
||||||||||||||||||||||||||||||||||
Sbjct: 34 ctacttttaatatatattattccagttctctcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1029
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1019
Effective search space: 631780
Effective search space used: 631780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_h11.g1 MSMg01no141_h11.g1 CHROMAT_FILE:
MSMg01no141_h11.g1 PHD_FILE: MSMg01no141_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:53 2005
(665 letters)
>mm_chr6_137489616_137490680
Length = 1065
Score = 1241 bits (642), Expect = 0.0
Identities = 660/666 (99%), Gaps = 2/666 (0%)
Strand = Plus / Plus
Query: 1 ttttcaaatcagtctactgcttgccata-aagcatttagacacaggaactgggaaagtgg 59
||||||||||||||||||||||| | | ||||||||||| | |||||||||||||||||
Sbjct: 201 ttttcaaatcagtctactgcttg-gagacaagcatttagatagaggaactgggaaagtgg 259
Query: 60 gaggtgtggcatctcaaggcacagcaaacggtcacacccattcacaagctgaatccttga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaggtgtggcatctcaaggcacagcaaacggtcacacccattcacaagctgaatccttga 319
Query: 120 caggaagtcacctccacgggagaccctgtggttacagtttcctacatgcagcaaaccaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caggaagtcacctccacgggagaccctgtggttacagtttcctacatgcagcaaaccaca 379
Query: 180 gcggcccttccttctgggaggggtgatcttaacgtaggaggctgggggacagccttgagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcggcccttccttctgggaggggtgatcttaacgtaggaggctgggggacagccttgagc 439
Query: 240 accagagactgacacagggcactacagtgaacttaaataagcaacagaaaggagcagtta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 accagagactgacacagggcactacagtgaacttaaataagcaacagaaaggagcagtta 499
Query: 300 gtgtcgcctcacattatctctcagttacaccactggaatttactgccccgtcccacacac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgtcgcctcacattatctctcagttacaccactggaatttactgccccgtcccacacac 559
Query: 360 ctgcccagctttctgctcaaggttgccggtcttcttctgtctgaagcttataaacgcatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgcccagctttctgctcaaggttgccggtcttcttctgtctgaagcttataaacgcatc 619
Query: 420 acgcttgggtcggcttcttctgactccactctgtggaaaccttgggtgtcttaaagttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acgcttgggtcggcttcttctgactccactctgtggaaaccttgggtgtcttaaagttat 679
Query: 480 ttttaaaacccttacgttcttcacttgctcttcagctcttgtattaatttggttccaaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttttaaaacccttacgttcttcacttgctcttcagctcttgtattaatttggttccaaga 739
Query: 540 ccccaagagttttcacccaaggactaatgagcaggggttcccctacagaatgaacaccac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccccaagagttttcacccaaggactaatgagcaggggttcccctacagaatgaacaccac 799
Query: 600 ctctgcaccgtgtgctgcagggcggagtgaaagccagacagttcttgcccagcaagcatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctctgcaccgtgtgctgcagggcggagtgaaagccagacagttcttgcccagcaagcatg 859
Query: 660 tagacc 665
||||||
Sbjct: 860 tagacc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
