Query= MSMg01no141_n02.b1 MSMg01no141_n02.b1 CHROMAT_FILE:
MSMg01no141_n02.b1 PHD_FILE: MSMg01no141_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:39 2005
(569 letters)
>mm_chr6_108356476_108357444
Length = 969
Score = 1031 bits (533), Expect = 0.0
Identities = 560/569 (98%)
Strand = Plus / Plus
Query: 1 gcgatccattcttgagaagtagagcccattaacaacagccaggtgcatcatctctttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgatccattcttgagaagtagagcccattaacaacagccaggtgcatcatctctttgta 260
Query: 61 cttttacaccaagtgccaaccaggaaatcacagtgattaatgaggccagacacgcttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttacaccaagtgccaaccaggaaatcacagtgattaatgaggccagacacgcttctc 320
Query: 121 ttgtagtagaaggtgacattcgagatggtgatgccccaggagatagcgaaacagtgttga 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ttgtagtagaaggtgacattcgagatggtgatgccccaggagatagtgaaacagtgttga 380
Query: 181 aaaccataagctgtgtgccgtgggtcggctgatggcctaacaggtggaggcacgtgctca 240
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aaaccataagctgtatgccgtgggtcggctgatggcccaacaggtggaggcacgtgctca 440
Query: 241 caggcctgacgacctgagttcaatccctgtatctactgggtagcaagagacaatcagctc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcctgacgacctgagttcaatccctgtatctactgggtagcaagagacaatcagctt 500
Query: 301 gtaaggattgtcctctgaattccaaacctgtgctgttgaacatgtgtacctggagacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaaggattgtcctctgaattccaaacctgtgctgttgaacatgtgtacctggagacaga 560
Query: 361 cagacagacagacagacacacacacacacacacacacacacacagctttaaatggggctt 420
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 cagacagacagacagacagacacacacacacacacacacacacagctttaaatggggcat 620
Query: 421 acattatggcttctcaccttggttgctactgcttccttctgtggactaaatttatccagc 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 acattatggcttctcaccttggttgctactgtttccttctgtggactaaatttatccagc 680
Query: 481 atataagcaagaattgccaaagaagtaaatcttcaagtgacaaatattccaaatctctcc 540
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 atataagcaagaattgccagagaagtaaatcttcaaatgacaaatattccaaatctctcc 740
Query: 541 taaggtgtagtttatacccagaaatcaag 569
|||||||||||||||||||||||||||||
Sbjct: 741 taaggtgtagtttatacccagaaatcaag 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_n02.g1 MSMg01no141_n02.g1 CHROMAT_FILE:
MSMg01no141_n02.g1 PHD_FILE: MSMg01no141_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:40 2005
(609 letters)
>mm_chr6_108519174_108520186
Length = 1013
Score = 1104 bits (571), Expect = 0.0
Identities = 604/623 (96%), Gaps = 14/623 (2%)
Strand = Plus / Minus
Query: 1 gtgatttgtgtaccaggatgaaattacaagcatttaatggcagagttggt---------- 50
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 895 gtgatttgtgtatcaggatgaaattacaagcatttaatggcagagttggtaaaaaaaaaa 836
Query: 51 aaaaaaaaaaaaaaaaaaaaaacaacacataggcttcatccgtcactgtggctctcagct 110
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 835 aaaaaaaaaaaaaaaaaaaaaacaacacatagtcttcatccgtcactgtggctctcagct 776
Query: 111 ctaagtctggaaactagtcatactttgtgccttagggataatataaaaaaataccgctgc 170
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 775 ctaagtctggaaactagtcatactttgtgccttagggataatataaaaaaatactgctgc 716
Query: 171 ccctgctgccgctaggtggtcctcaacagctgtttctgttttgatgcgatagactcctgt 230
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 715 ccctgctgccgctaggtggtcctcaacagctgtttctgttttgatgctatagactcctgt 656
Query: 231 tgtgaccttagtttcacctttttcctgccagtagccactgtaaggtcctgttgctactag 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 655 tgtgaccttagtttcacctttttcctgccagtagccactgtaaggtcctgttgctacaag 596
Query: 291 aattaagggaaaacccattagcaatgagttataaccacacccctgacttctgcagaatgt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aattaagggaaaacccattagcaatgagttataaccacacccctgacttctgcagaatgt 536
Query: 351 tgagtaaatcaaacttctgttctttctggaaaaaacctgcagctgaaactgggatcaggg 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgagtaaatcaaacttctgttctttctggaaaaaacctgcagctgaaactgggatcaggg 476
Query: 411 ctaaagaaacccagctggattccgtgtctgcctgcccctggcagtttctgttatgatctg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctaaagaaacccagctggattccgtgtctgcctgcccctggcagtttctgttatgatctg 416
Query: 471 tttatcatacaaca----tttttttttttgaggatgtgactagcttttctaagtctaaga 526
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttatcatacaacatttttttttttttttgaggatgtgactagcttttctaagtctaaga 356
Query: 527 tgatgacatccactgtgggaggcctcacgcctaaaagacacaggaacagcccattaatcc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgatgacatccactgtgggaggcctcacgcctaaaagacacaggaacagcccattaatcc 296
Query: 587 tgacccctctgctcaacgcttgt 609
|||||||||||||||||||||||
Sbjct: 295 tgacccctctgctcaacgcttgt 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1013
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1003
Effective search space: 600797
Effective search space used: 600797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
