Query= MSMg01no142_c09.b1 MSMg01no142_c09.b1 CHROMAT_FILE:
MSMg01no142_c09.b1 PHD_FILE: MSMg01no142_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:26 2005
(364 letters)
>mm_chr6_54637978_54638742
Length = 765
Score = 601 bits (311), Expect = e-176
Identities = 350/363 (96%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 1 acttaggaagcctggccttgctcagggccctcttccccctcgggacaccaggagggcatc 60
||||||||||||||||||||||||||| |||| || ||||| ||||| |||||||||||
Sbjct: 563 acttaggaagcctggccttgctcagggacctcatctccctccggacattaggagggcatc 504
Query: 61 ctaccaggcatcataaaagcacacatggatatcagtctgcatccaggtttgctgctgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctaccaggcatcataaaagcacacatggatatcagtctgcatccaggtttgctgctgtta 444
Query: 121 ctggggct-ggggggacatttatctaggtgaggaaatctgtgttatcacatcttttaaat 179
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctggagctgggggggacatttatctaggtgaggaaatctgtgttatcacatcttttaaat 384
Query: 180 taggggtaaagatctagaataagctagagaaacagacttgaggtccggatgaagaagccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taggggtaaagatctagaataagctagagaaacagacttgaggtccggatgaagaagccc 324
Query: 240 gagttctgcagaaccaacaagccagaaacatggggcacccgacaggtaccacaggtctgt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tagttctgcagaaccaacaagccagaaacatggggcacccgacaggtaccacaggtctgt 264
Query: 300 ctcaagggtttcaactgaatggtttgttctgaggtctgggaagaggggggtgtttggtgg 359
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 263 ctcaagggtttcaactgaatggacagttctgaggtctgggaagagggaggtgtttggtgg 204
Query: 360 atg 362
|||
Sbjct: 203 atg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_c09.g1 MSMg01no142_c09.g1 CHROMAT_FILE:
MSMg01no142_c09.g1 PHD_FILE: MSMg01no142_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:26 2005
(229 letters)
>mm_chr6_54484512_54485140
Length = 629
Score = 406 bits (210), Expect = e-118
Identities = 225/230 (97%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 1 actccagacaccccaggggcagcccagg-gctccttgctgagcacccctgtgctttgttc 59
||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 201 actccagacaccccaggggcagccc-ggagctccttgctgagcacccccatgctttgttc 259
Query: 60 aagctgggctgttcacagagttttccccacggcatcaccctcagccaggtgtcgagctga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aagctgggctgttcacagagttttccccacggcatcaccctcagccaggtgtcgagctga 319
Query: 120 ccactgcactgcccttctctgctcacacccccgtgttgcccccagaaaacttcctcctca 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 ccactgcactgcccttctctgctcacacccctgtgttgcccccagaaaacttcctcctca 379
Query: 180 catgaaaaccccaggttctaaacttgctagaaatcatagctctttagctt 229
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catgaaaaccccaggttctaaacttgctagaaatcatagctctttagctt 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
