| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-142H17.T7 (MSMg01no142_h17.b1) | MSMg01-142H17.TJ (MSMg01no142_h17.g1) |
|---|
| ACC | AG347081 | AG347082 |
|---|
| length | 1,255 | 1,236 |
|---|
length of high quality
(start - end) | 533 (129 - 661) | 568 (139 - 706) |
|---|
| definition | CHROMAT_FILE: MSMg01no142_h17.b1 PHD_FILE: MSMg01no142_h17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:02:12 2005 | CHROMAT_FILE: MSMg01no142_h17.g1 PHD_FILE: MSMg01no142_h17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:02:13 2005 |
|---|
| singlet/doublet | doublet | doublet |
|---|
| BLAST hit | unique | unique |
|---|
| Map location. | (103,898,430 - 103,898,962) | (103,784,185 - 103,784,752) |
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| sequence | CAATTCTNNNNNNGATCACTGGGCGCTATAGACTCCTATAGGGAGAGGAT
CCGCGGAATTCCATGTTTTGGGAGAACCCTTTAAAGACCCGTTTCCTGTG
TCACAACTTTTAAAAAAACCGTTGACTTCTCATGACTCCTATTGATCAAG
CAACTTTACTAAACTTTTCGAACTAATATCCCCTAAAATAATGTTGTCTT
CATGTATAGTCTTAATATTCATGTCTCTGCAACCATCAAGCTGAAAAACT
TCTACTGCGTTGAAGGTTAGACTACTCATCCATTTGAATGTGTCCCCGAG
GCAGATAAAACAATGCACTTGGAGCAATGTATCGGTAAGACCGAAACATG
CACAGTACCCATTCCAACCTCCACTCAGGGCATCCCACTCTCCACTAGTA
CTGATTCATTTTAGTATAAAATCCAGAAACCAGTGCCAATGTAGTTCACA
CCAGTAGATAGTTTATTCTTCTTGAGGTCATGCTAACAGGCTTGTCTAGG
CCTATACTACTTCTATGGGAAACACATTATCTGTTTTTTTGCAACTCGGA
GTAGAATTTGAGAATTCATTGCCCTCAAAATGCATTTTCTCAATTTTTCT
CTCACACTCTTTTTGTAAAACTTGGTTCCAAATAAAGTGTTCAGTATATA
GATGATCACAGAGTGCCGTGCAGGTGGATTTGCCCTTGGTACCAGACACA
GCTGTGCCTATTAAATACAAAATATGGTATTTAATTTGGTAAAATTGCTA
ACGGCAGGCAGGATTGTGCAAGGGAAAGTCACCTTCTCTTGTCGTCAGAA
ACAGACAAAGATGTTCATGACCAGAATTGTTTTTCCAAATGTTTCTGTGC
TACAATTGCATTTGGGGTCTTTTTCAAGCACTGAACAATGAAATGGGTAA
CAATTTGCCAAGCACTTACAGCTGTGTGTCTGTTATCCTTGTATGCGAAT
TTCTTTCTTGTATAATATGTTTTAAAAAAATTATGATGATGACTTTTTTC
ATTTCTCTATTATTTTCTCATTTCACTTTTTAAATGTTCCTCTTGCACTT
ATTCCATTTATCATTCACTTTCTAATTCTCTCTTTATTTTGGTGCCTTTT
TTTTATATTCTGATTTCTTTCTACTAATTGCTTTCATTATTCTCACCATT
TTTTTTTTTTCTTTTTTTGTCTATTTCGCTATTTAATATCTTTTTTCATT
ATTTCTTTTTTTCCTTTCTNTTCTTCTTTTTTGATCTTTCTCACCTATAT
TTATC
| CCTTTCCTNTNNNAATGATGGCAGGCTGGXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTTTAGATCCTCCTGCCGGTACT
TCTGGAACACTGATTCCCCTTGTGCTCCTGCACACCCACTTTACACATCA
GATTTTAAAGATTAGAGACCTAAAATGTAATAGAAAGTGTCTCAACAATT
TTTACAATGAATTTAACTTGAAATTATCATTTGAGCATGTGGTACTAATA
AAATATTAAGCGGGGTGTAGCTGTTAATATTAACTTTTTAAATGTGAGTA
CTACACACTCTTTAATTGCTAGTGTGCTGTGCACTTTATTTCTACTGATT
TATACATACCTCTAAAGCTACTCCTTTGCTGAGGAAACATTCCTACATCA
TGCTGCCTTGTTTTGTGGTCCCGATTTTGTCATTTTGTCTTTGCCTAGAG
TTCTTGGTTCTCCTGTGTTCGTCCGGAAGCCCCATTTGAACTCTTATGGT
AGCGTTGTGCAAATGACCCCAAAGTGATTCTGAGGATGCATAACGTGATC
CAAGATCTCTTGCCCTCACTCACCTGCGAAAGGAAGAGTCCCCGGATCCC
CAGGGTGTGTGGCCACCTACGGGAAACTTTGGCATAAAGTTCTGTCTTCC
TTCTTCCATTGCTGCGGTTTTTGAAATCACAGATTTCTGGGGAACAAATG
TCCCGTGTGCGCACTGCAGGTGTTCAGATAATCTGACTCCTTTAGTTTTC
ACAGACGATCAGCAAGTGTCATCATTATCTCCGTGCTGCAGATGAAAAAT
TGAGGCCCAAGCAGGTGAAGAGACCTTGTGGAGACCACCCCGCTGGCCAT
ATGCAGAAGGGACCTTAGAAGCCTGCTTTGTGCGCTTTCCTTAAGCTGTT
GCTCAACCGCTTCATGATATCATAACACCCAAAGGCTTGGAATGTGGACA
GCCATCCAGCATATAGGCCCTCTTTTTTTGGCTATATGGTCTTTTGCTCC
CTCCTTCACTTGGTGTTTAAGTACCTATTAAAATCTTTCCATAGGCTAAT
AATTTTTTCCTTCCCTTCGGGGATTCTCTAAGTTTTATAGTTTCTTTTTT
CCACTCCTCTTTCTTTCCTCTTTTCTACTTCTTTATATTTCTGTAAATTC
TTATATATTTTTCTTTTCTGTATACTCTTCCTTTCTTTAATACATTCATC
ATGTACCTCTACTCTTTCATTTTTCTCGCTTCTTTT
|
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| quality values | Open.Hide.11 11 11 11 11 11 3 0 0 0 0 0 0 3 6 6 6 9 7 7 8 8 9 12 12 10 7 6 6 6 8 15 19 10 8 8 10 11 12 15 19 35 33 31 31 31 28 28 34 43
50 50 48 47 42 42 47 42 38 36 35 30 24 24 28 30 28 25 25 22 12 11 9 19 10 22 6 7 7 7 6 6 11 12 12 10 10 10 10 10 10 18 21 25 27 15 15 10 10 10
15 19 21 27 33 33 36 47 30 30 33 33 33 33 27 27 15 11 11 11 11 11 17 12 12 10 13 23 20 28 22 29 28 37 23 23 11 10 10 15 15 25 25 41 47 47 47 34 30 28
25 28 30 36 37 39 39 30 30 29 29 34 34 40 43 37 30 30 20 20 20 29 27 32 32 42 42 36 40 37 37 31 24 24 22 29 37 44 44 47 43 43 57 43 36 37 30 30 32 36
32 35 35 35 42 42 48 46 44 39 39 42 42 43 43 43 43 57 44 44 43 43 43 43 43 57 50 57 50 57 57 48 48 43 50 37 32 28 23 23 27 41 43 38 35 35 35 43 44 52
52 52 52 57 57 57 43 42 42 31 31 27 38 38 43 57 32 32 14 14 14 32 32 39 39 39 43 43 57 57 57 52 52 57 52 52 52 43 43 42 43 43 52 52 57 57 52 52 37 37
32 32 20 20 20 38 41 43 43 33 35 35 43 43 43 35 35 35 38 38 20 20 20 27 32 43 43 43 30 19 11 11 11 14 21 33 42 42 48 44 44 43 47 47 47 47 44 44 42 42
35 43 37 37 37 43 37 40 41 41 41 43 43 48 47 47 47 43 37 40 32 32 30 32 30 30 32 32 32 33 37 43 47 59 59 43 43 33 33 33 33 32 37 37 36 34 48 48 48 39
37 39 39 36 36 30 26 20 18 11 21 18 9 9 11 15 25 32 41 41 47 47 34 32 20 20 15 25 19 24 25 22 18 20 20 20 20 28 28 30 28 28 23 23 28 31 42 47 54 54
47 34 41 15 15 12 19 15 32 24 36 30 32 37 47 47 57 57 59 59 57 54 42 42 32 28 28 30 35 42 44 59 43 32 32 14 14 14 24 24 18 18 32 31 42 42 43 43 33 27
27 29 44 38 43 35 35 35 43 43 52 52 43 43 43 38 32 18 17 14 38 30 43 43 52 43 27 38 15 15 11 16 16 36 36 43 42 44 43 43 42 35 42 42 43 32 41 20 24 32
12 12 11 15 15 32 32 48 42 44 28 18 18 32 32 38 32 25 23 32 41 32 43 42 42 42 39 43 43 44 44 37 37 37 39 42 47 46 43 43 43 43 46 47 48 48 48 48 48 40
40 29 32 32 42 42 48 48 57 57 57 57 59 59 48 48 57 30 30 20 20 18 27 23 29 30 24 30 19 19 17 22 22 34 32 41 46 46 37 41 28 32 20 32 20 23 31 34 28 32
23 23 23 20 28 28 28 21 28 23 23 23 23 23 23 22 15 19 18 16 19 15 12 11 11 11 23 22 42 28 40 28 28 28 40 24 32 21 18 23 16 22 18 19 19 15 16 16 21 15
14 15 15 23 21 22 22 22 26 29 20 16 13 10 11 11 18 12 23 21 12 12 16 24 19 14 10 10 10 22 30 46 46 34 34 19 19 12 14 15 23 32 34 24 22 22 24 25 25 25
16 16 10 15 15 13 13 11 15 11 11 9 9 15 16 22 29 28 24 23 23 15 11 11 11 20 13 15 12 10 15 11 16 21 18 12 11 8 8 8 8 10 8 8 8 10 8 9 9 9
8 13 10 11 11 19 10 11 9 9 9 9 9 13 13 9 9 9 17 10 9 9 9 9 9 11 15 30 32 22 24 11 11 11 10 10 11 11 19 16 12 10 10 13 10 11 10 11 10 8
8 8 8 8 12 15 10 8 8 8 8 15 15 8 8 8 8 8 8 11 15 8 8 8 10 10 10 10 8 8 10 12 16 17 13 9 9 9 10 9 10 10 10 12 10 6 8 6 6 8
8 10 10 13 21 14 12 10 10 9 9 8 8 10 8 8 8 15 12 10 10 10 11 15 10 10 8 8 8 8 9 9 11 9 10 8 10 8 10 10 10 8 8 8 8 9 11 11 15 12
10 8 6 6 10 8 10 8 10 6 6 8 10 8 8 8 8 8 8 8 9 10 9 11 9 9 8 8 8 8 10 10 12 8 8 9 9 9 9 9 9 11 16 12 14 13 10 8 8 8
8 8 8 8 8 8 8 10 10 8 8 8 10 10 11 6 6 8 8 8 8 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 6 6 8 8 8
8 12 15 10 9 9 9 10 8 8 9 9 8 8 9 9 10 9 9 8 8 8 8 8 8 8 10 13 12 10 8 8 8 8 8 13 11 10 11 14 14 10 10 10 9 9 10 10 12 13
13 12 11 8 8 6 6 8 8 8 8 8 6 8 11 6 8 8 13 15 12 9 9 9 9 9 10 10 8 8 8 15 17 11 19 10 10 9 8 10 8 8 8 15 8 8 8 6 8 8
8 14 15 19 13 16 14 10 8 8 8 8 8 10 16 16 17 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 10 8 8 7 7 10 8 6 6 10 8 10 8 6 8 6 7 10
9 6 7 6 9 9 12 12 11 8 8 8 8 8 8 10 6 7 3 0 3 8 8 12 10 11 8 8 8 8 10 8 8 8 8 8 8 8 8 7 6 8 8 8 8 8 10 6 6 8
8 10 13 10 10 | Open.Hide.11 11 11 11 11 9 9 3 0 3 0 0 0 3 6 6 9 7 6 8 6 6 6 6 6 10 6 6 6 7 11 9 19 13 8 8 9 8 11 12 19 19 19 8 9 9 22 19 28 22
24 24 28 28 35 35 37 37 37 36 36 42 38 38 53 53 50 50 50 50 42 41 27 23 9 9 10 12 12 12 10 9 9 12 16 17 16 13 10 16 16 13 13 26 29 36 36 36 27 27
29 28 28 37 27 43 43 32 29 21 21 29 33 36 24 23 11 13 10 10 14 14 11 14 14 17 18 10 12 13 19 26 32 21 21 8 8 8 17 19 33 33 37 37 25 28 28 24 25 25
25 35 59 39 43 44 39 39 39 59 43 26 23 11 11 23 28 34 39 39 42 39 32 32 30 33 25 25 36 32 36 23 23 23 44 37 43 36 36 32 32 36 36 28 30 30 37 44 57 57
47 47 43 47 43 48 48 48 48 57 54 47 47 47 47 47 47 47 46 50 43 43 37 43 57 57 57 57 48 48 50 57 50 52 43 43 28 28 17 28 28 33 32 32 38 36 37 37 43 43
52 42 43 43 52 42 43 27 24 14 13 13 24 24 43 43 37 37 32 43 28 39 33 33 35 43 43 52 57 43 43 39 39 35 41 43 43 43 57 52 52 52 57 57 39 39 39 35 43 43
44 44 43 31 31 31 44 44 43 43 52 44 44 68 68 68 62 62 62 62 62 62 39 39 43 43 43 43 33 20 20 26 26 32 62 62 62 62 45 45 45 62 43 52 52 52 52 43 43 31
35 35 43 43 43 52 43 43 43 52 43 43 43 39 39 47 47 62 52 52 52 52 52 62 62 43 43 39 62 43 43 31 31 31 39 43 43 62 52 52 62 62 52 43 43 23 23 23 43 43
45 45 52 43 43 39 39 39 24 21 19 39 39 43 39 39 39 31 39 39 43 39 43 35 35 35 43 43 21 21 21 43 43 43 62 62 52 43 43 39 39 39 39 39 39 44 44 62 43 43
39 39 43 43 43 39 43 29 29 21 21 31 33 33 43 20 17 17 13 23 13 26 26 43 35 35 43 26 26 26 35 43 43 52 57 57 57 57 57 57 57 39 39 42 57 44 34 20 14 18
16 35 35 35 35 35 26 26 23 43 41 43 33 38 41 35 35 41 41 41 39 39 38 38 28 28 28 32 32 43 38 38 20 20 32 38 43 43 37 35 35 43 38 41 31 28 28 43 38 44
29 31 31 44 44 32 33 33 43 44 57 57 57 50 44 43 33 33 24 27 12 14 14 19 24 24 28 32 35 42 42 57 44 44 35 33 31 26 26 23 36 36 42 42 39 42 39 39 42 44
39 43 43 37 36 30 30 30 31 36 42 42 32 33 33 36 35 32 40 24 21 13 13 10 17 13 14 14 14 27 32 37 43 43 57 40 43 37 23 23 19 23 26 31 32 37 33 25 33 17
19 10 10 10 21 17 29 32 36 36 36 32 30 15 15 11 21 21 37 30 34 32 33 30 37 37 39 39 37 43 36 37 37 23 23 20 18 18 13 13 14 15 15 15 32 36 37 37 28 28
22 24 22 19 13 12 14 13 10 13 18 24 22 22 23 20 11 10 9 9 9 9 9 11 22 18 18 14 13 13 9 13 11 23 13 14 14 18 18 23 23 22 26 15 16 18 28 25 26 15
11 11 11 11 11 12 12 15 19 18 11 18 16 21 15 17 21 15 10 8 8 8 10 10 20 26 26 30 21 11 8 8 8 11 13 14 14 13 15 8 8 8 14 17 13 13 13 14 11 11
12 12 9 10 10 18 13 10 8 8 8 8 8 9 9 12 15 18 11 11 11 12 11 19 15 12 12 12 12 10 13 15 15 12 21 11 10 10 9 9 8 8 8 8 8 8 9 9 8 8
10 10 8 10 9 8 8 8 8 8 10 10 8 8 8 8 8 11 12 11 8 8 8 8 8 8 8 15 16 20 19 16 10 8 8 8 8 10 11 15 18 12 11 11 10 14 15 16 8 8
8 10 10 10 10 11 8 8 8 6 6 6 6 8 8 8 10 12 10 9 9 9 9 10 10 10 10 10 15 10 10 10 10 9 10 9 9 8 8 8 8 8 8 9 9 11 9 10 9 9
9 9 8 12 8 8 8 8 8 8 8 8 8 10 8 10 11 8 8 8 8 8 8 10 10 15 8 8 8 8 9 8 8 6 6 6 10 8 8 8 9 9 9 10 11 9 9 10 10 10
10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 8 10 9 9 9 9 9 9 9 9 10 10 10 10 10 10 11 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8
8 8 10 10 8 8 8 8 8 6 6 8 6 6 6 6 8 8 8 8 10 10 10 11 10 8 8 10 8 8 8 11 11 10 8 8 8 8 8 8 8 8 9 11 11 11 11 11 11 14
10 10 10 8 8 8 8 8 8 8 9 8 8 10 13 15 8 8 6 6 8 8 13 13 10 10 10 8 8 10 10 8 8 8 8 6 6 6 10 8 7 6 8 8 10 8 7 7 8 8
8 10 10 8 8 6 6 8 8 8 8 8 7 6 8 8 10 8 8 6 6 8 8 8 8 8 8 8 6 8 7 6 8 6 8 13 12 14 13 15 10 9 9 10 10 10 10 8 8 10
8 8 8 8 9 10 9 9 9 9 9 8 10 7 9 12 10 8 8 8 8 8 12 6 6 8 6 6 6 6 8 7 8 8 8 8 |
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