ATCTATAATTGCXXXXXXXXXXXXXXXXXXXXXXXXTACAGAATCCGCGG
AATTCAAGGGTAGATATACTGAATTGAGAGGGTGGATGGGGGAACACCCT
CATAGCAGCAGGGGAGAAGGGATGATATGGAGGAGGGGGGTTCTCCTTCC
GCTCCCCCCCTGCTTCCTCTCTTCTCCTTTCCCCTTTCTCTCCCCCCCTT
TTTCTTCCCCCCCCTCTTTCCCTCCTCTCTCCCATCGCCCTCTCGTTCCC
CTCCTCTCCCCCTCTATTCTCATATCACTCTCTCTTCGCCTCTTGCCCCC
CCTTCCCGGCCTTCCCCCCCCCCTCCTCTCTTCTTTTTTTTTTCCCTACT
ACCACCTCATCACCAACTCTCTATCATTTCATCTCTACCCCCCTCTATAT
TCTTTTTCCCTTTATTCCTATACTTCTATTTATTACCCCAACCTTTCTCC
CCCAAAATTTCCCATCTATCCTTTTTTCATCTCCCACCCCCTCTTCCCCC
ATTTCCTCCACTCCCTTTCCCCTCCTCCTCCCCCCTCTCACCTTCTCCTC
CTTTACCTTCTCTCCTCTTCATCCTCCCATTTCCTCCCTTTCTTCTTTCT
TCACCTATATTCCTTTCCGTCATTCCTCTCTTTTACTTCTCCCACCTCCC
TACCATTCTATCCCTTTCCTCTCTCACCCCACCCCCTTCTACTTTATTCC
CTCTATCCCTTTTATCCTACTTCTCCCTCCCCTATTTCCTCTACCTCCTC
CCTCTCTTTTCTCCCTTCATATCTCCCTTCCTCTCCTACCCTTCCCTCTT
ATCCCTTCCTTTCTCCTTTCCACT

NCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCTGAGCCAAAAAGCTTTCACCTGC
ATTATTCCATTAACCTCCTTGCATTGTTACGGGAACTGTGTTTATTTTTT
GAAATGACATTCAAATATATCCGTAAAAGAAACTTCGGGTCTCCCTAGTG
TTCTCTTCTCTTTCAGCCAACACTTTACCTATGAAAAAAAAATCAATAGC
TTATTTCTTTTCTTATATCATCACATATTAAAACAGTAGTAGCTAGGAAA
AAATGTCAGCATGAGTTTTTCAATGATGCTCTCTTCCTAAATTATTCTAC
CCTCATCATTAACCTGCATATTTAGAGCAAAGAAGTTCTCTTTGTTCTTA
AAAATTAGAACTGAATTACACGCCTTTGTTCACTTGTGGGTTTGTGTGGT
ATCTATGTGCATAAATTAAAAATTAGAACTGAATTACACGGTTTTGTTCA
CTTGTGGGTTTGTGTGGTATCTATGTGCATAAATTAATGTAATGTGAAAC
TATCTCTTACCAGTTGATTGAATTAATATCTGCGACTTTCAATAGAATTT
CCTTTATGCTTCCAAATTAGTTCAAATTCCCAGAAATATCAGTTTAAATT
GGTGAAACTTTTCTGGAACACTTTTCAAGAGTGCTATGGAAGCCCTGTAT
CTTATCCTGCTATTGTTGTTCAAATGATAAAG

Query= MSMg01no144_p21.g1 MSMg01no144_p21.g1 CHROMAT_FILE:
MSMg01no144_p21.g1 PHD_FILE: MSMg01no144_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:57 2005
         (658 letters)



>mm_chr6_110632411_110633469
          Length = 1059

 Score = 1226 bits (634), Expect = 0.0
 Identities = 652/658 (99%), Gaps = 1/658 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctctgagccaaaaagctttcacctgcattattccattaacctccttgcattgttacggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ctctgagccaaaaagctttcacctgcattattccattaacctccttgcattgttacggga 799

                                                                       
Query: 61  actgtgtttattttttgaaatgacattcaaatatatccgtaaaagaa-acttcgggtctc 119
           | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 798 aatgtgtttattttttgaaatgacattcaaatatatccgtaaaagaatacttcgggtctc 739

                                                                       
Query: 120 cctagtgttctcttctctttcagccaacactttacctatgaaaaaaaaatcaatagctta 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cctagtgttctcttctctttcagccaacactttacctatgaaaaaaaaatcaatagctta 679

                                                                       
Query: 180 tttcttttcttatatcatcacatattaaaacagtagtagctaggaaaaaatgtcagcatg 239
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 678 tttcttttcttatatcatcacatataaaaacagtagtagctaggaaaaaatgtcagcatg 619

                                                                       
Query: 240 agtttttcaatgatgctctcttcctaaattattctaccctcatcattaacctgcatattt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agtttttcaatgatgctctcttcctaaattattctaccctcatcattaacctgcatattt 559

                                                                       
Query: 300 agagcaaagaagttctctttgttcttaaaaattagaactgaattacacgcctttgttcac 359
           ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||
Sbjct: 558 agagcaaagaagttctctttgttcttaaaaattagcactgaattacacggttttgttcac 499

                                                                       
Query: 360 ttgtgggtttgtgtggtatctatgtgcataaattaaaaattagaactgaattacacggtt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttgtgggtttgtgtggtatctatgtgcataaattaaaaattagaactgaattacacggtt 439

                                                                       
Query: 420 ttgttcacttgtgggtttgtgtggtatctatgtgcataaattaatgtaatgtgaaactat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgttcacttgtgggtttgtgtggtatctatgtgcataaattaatgtaatgtgaaactat 379

                                                                       
Query: 480 ctcttaccagttgattgaattaatatctgcgactttcaatagaatttcctttatgcttcc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctcttaccagttgattgaattaatatctgcgactttcaatagaatttcctttatgcttcc 319

                                                                       
Query: 540 aaattagttcaaattcccagaaatatcagtttaaattggtgaaacttttctggaacactt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaattagttcaaattcccagaaatatcagtttaaattggtgaaacttttctggaacactt 259

                                                                     
Query: 600 ttcaagagtgctatggaagccctgtatcttatcctgctattgttgttcaaatgataaa 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcaagagtgctatggaagccctgtatcttatcctgctattgttgttcaaatgataaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space:   679752
Effective search space used:   679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)