Query= MSMg01no145_c14.b1 MSMg01no145_c14.b1 CHROMAT_FILE:
MSMg01no145_c14.b1 PHD_FILE: MSMg01no145_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:10 2005
(336 letters)
>mm_chr6_113489506_113490241
Length = 736
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 1 acagataaaa-acccatatacataaaataataaatatttttaaaaaaacaacaactgtgt 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acagataaaacacccatatacataaaataataaatatttttaaaaaaacaacaactgtgt 259
Query: 60 cagaaaggaaaaagacctgcctgattaataatgacatataaagcctcaagtatagaaaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagaaaggaaaaagacctgcctgattaataatgacatataaagcctcaagtatagaaaca 319
Query: 120 tcaaatatttgagtttcattagcaaagacagaaacttaaaataaaaaatagttctgggcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaaatatttgagtttcattagcaaagacagaaacttaaaataaaaaatagttctgggcg 379
Query: 180 tggtagcacttgcctttaattccagtactaaggaggcagaagcatgtggatttttgagtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggtagcacttgcctttaattccagtactaaggaggcagaagcatgtggatttttgagtt 439
Query: 240 cgaggccaggctggtctatagagtgagttccatgacatccagggctacacaatgaaaccc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaggccaggctggtctatagagtgagttccatgacatccagggctacacaatgaaaccc 499
Query: 300 tgtcttgaaaaaacaaaacaaataaattaatttattt 336
|||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtcttgaaaaaacaaaacaaataaattaatttattt 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_c14.g1 MSMg01no145_c14.g1 CHROMAT_FILE:
MSMg01no145_c14.g1 PHD_FILE: MSMg01no145_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:10 2005
(343 letters)
>mm_chr6_113645738_113646480
Length = 743
Score = 642 bits (332), Expect = 0.0
Identities = 340/344 (98%), Gaps = 3/344 (0%)
Strand = Plus / Minus
Query: 1 cagaccagcctgtgacacttaaaatgcccccgccccccagaaccaaaacagtaaagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cagaccagcctgtgacacttaaaatgcccccgccccccagaaccaaaacagtaaagaaaa 289
Query: 61 gagtttgtcctactacttcattcccagactgctcttggccaacagctgtggtggcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gagtttgtcctactacttcattcccagactgctcttggccaacagctgtggtggcaagaa 229
Query: 121 ctaaaggctctccacactcagctggccttcac---tttttttttttttaattacccaatg 177
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 228 ctaaaggctctccacactcagctggccttcacttttttttttttttttaattacccaatg 169
Query: 178 caggagccaagcccatggaatagcacctcccatactcagagtcttctgtcttcagttcat 237
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 caggagccaaacccatggaatagcacctcccatactcagagtcttctgtcttcagttcat 109
Query: 238 cctctcggtaaactccctcctagtcacagccagagcatatctaactcctagagggttgtt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cctctcggtaaactccctcctagtcacagccagagcatatctaactcctagagggttgtt 49
Query: 298 aacccaagttcacagtgaaggttaaccatcccagaagccatctc 341
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aacccaagttcacagtgaaggttaaccatcccagaagccatctc 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
