NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGC
GGAATTCAATTGTCCATGGCTTCACATATCTAATTTGTAAATGATGCTAT
TCCTCATTGCATAATCTGTTTCAAACCTATGATCACAGCAAGGCAGCTGG
ATGGGTGTCTGACCATCTCTTCTAACTCCTGTTCTTGCCCTTTCTTCAGT
TTATATTATTATCATTTAGCAGTCAATCTATAGTTTCAAAGTGCAATTGG
TAAAATGGAATGTTTTAGATATATATGGTATTTTTGGAACATATTTAACA
AATATTTCATTTGGCTTTATCATTTAAGAATGTACAAGCTTGTGATGTTT
AGTACACATGTAAGAATATAATTTCTTCTACATAAATTTAGTCAGACACA
ATAAAGATATTTAGTGCAGTTTTAAATATAAATTATTTTTCTAATAGATC
ATAAGCCTTCCTAGAAATATATGCATGTTTTAAAACAGGTAAATTTTGAA
TTGTAACCATTATAAATTGCTTTATAAATTTCTTTGAGGTATACATTAAA
TATGGCAAAAATTTTGCTGACATGACCTTGATATAGCTGTCTTTTGTGAG
GCTATACCAGTGCCTGGCAAATACAGAAATGGATGCTCACAGTCATCTAT
TGGATGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAATGTACCCAAGG
T

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGAATGCTAATGCATAGGTACTTAA
TCTAAGAAAATCACTGGACAGGTCTGAGCCAGTACCCTGAGAGCCCTTGG
CCACTAGCTCCACACCAAGTCCTACAACACCCAGGGAAGCTCAAATCCCA
GGTGCTCTAACATGCCCAGGGGCATAGGATCATAGGAACACAGGATCTCA
GGAGCTTGGTCACACCAGGATTTCAGGATCCCAGAGACAGATTGACTTCC
AGGAGCTCTTACACAAAGGATCTCAGAAACACAGAGACATCAAGACCCTG
AGGAGTTCTGACACAACTAAGACAACAGGAGGGACAGACTCACATAGAGA
CAGTGAGTGCAAGCAGCACTAGAGATAACCAGAGGGCAAGAGGCAAGTTC
AAGAATATAAGCAACAGAAAACAAAGTTACTTGGCATCATCAGAACCCAG
TTCTCCCACTATAGCAAGTCCTGGATAACCCATTACACTAGAAAAGCAAG
ATTCAGATTTAAAATCACTTCTCATGATGATGATAGAAGACTTTTTTTTT
TTAACTGTTCAAGAAAGTTGTTTTTAATATTTGGGCAACTGTTTTCTCTG
CTGCACTATCCAGTGGGAAGAAAATTCCTATTTGATTATACTTTTATAGA

Query= MSMg01no145_f21.b1 MSMg01no145_f21.b1 CHROMAT_FILE:
MSMg01no145_f21.b1 PHD_FILE: MSMg01no145_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:26 2005
         (654 letters)



>mm_chr6_148316971_148318024
          Length = 1054

 Score = 1139 bits (589), Expect = 0.0
 Identities = 636/653 (97%), Gaps = 3/653 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaattgtccatggcttcacatatctaatttgtaa---atgatgctattcctcat 60
           |||||||||||||||| || ||||||||||||||||||||   || ||||||| ||||||
Sbjct: 201 ggaattcaattgtccaggggttcacatatctaatttgtaacagattatgctatgcctcat 260

                                                                       
Query: 61  tgcataatctgtttcaaacctatgatcacagcaaggcagctggatgggtgtctgaccatc 120
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 261 tgcataatctgtttcaaacctatgatcacagcaaggcagctcgatgggtgtctgacaatc 320

                                                                       
Query: 121 tcttctaactcctgttcttgccctttcttcagtttatattattatcatttagcagtcaat 180
           |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 321 tcttctaactcctgctcttgccctttcttcagcttatatttttatcatttagcagtcaat 380

                                                                       
Query: 181 ctatagtttcaaagtgcaattggtaaaatggaatgttttagatatatatggtatttttgg 240
           |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 381 ctatagtttcaaagtgcaattggtaaaatgaaatgttgtagatatatatggtatttttgg 440

                                                                       
Query: 241 aacatatttaacaaatatttcatttggctttatcatttaagaatgtacaagcttgtgatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacatatttaacaaatatttcatttggctttatcatttaagaatgtacaagcttgtgatg 500

                                                                       
Query: 301 tttagtacacatgtaagaatataatttcttctacataaatttagtcagacacaataaaga 360
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tttagtacacatgtaagaatataatttcttctgcataaatttagtcagacacaataaaga 560

                                                                       
Query: 361 tatttagtgcagttttaaatataaattatttttctaatagatcataagccttcctagaaa 420
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttagtgcagttttaagtataaattatttttctaatagatcataagccttcctagaaa 620

                                                                       
Query: 421 tatatgcatgttttaaaacaggtaaattttgaattgtaaccattataaattgctttataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatatgcatgttttaaaacaggtaaattttgaattgtaaccattataaattgctttataa 680

                                                                       
Query: 481 atttctttgaggtatacattaaatatggcaaaaattttgctgacatgaccttgatatagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttctttgaggtatacattaaatatggcaaaaattttgctgacatgaccttgatatagc 740

                                                                       
Query: 541 tgtcttttgtgaggctataccagtgcctggcaaatacagaaatggatgctcacagtcatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtcttttgtgaggctataccagtgcctggcaaatacagaaatggatgctcacagtcatc 800

                                                                
Query: 601 tattggatggaacacagggcccccaatggaggagctagagaatgtacccaagg 653
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 801 tattggatggaacacagggcccccaatggaggagctagagaaagtacccaagg 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)