Query= MSMg01no153_l14.b1 MSMg01no153_l14.b1 CHROMAT_FILE:
MSMg01no153_l14.b1 PHD_FILE: MSMg01no153_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:09 2005
(250 letters)
>mm_chr6_57454727_57455376
Length = 650
Score = 429 bits (222), Expect = e-125
Identities = 243/250 (97%)
Strand = Plus / Plus
Query: 1 catcctttaaaagctttatggattcatgtcagctttggaggaaggaacaacccaggctta 60
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 catcctttaaaggctttatggattcatgtcagctttggaggaaggaacaaaccaggctta 260
Query: 61 aatgtgttatcctgaaaccacatcataaaccaactgtttgactgaggccccagagccatg 120
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 aatgtgttatcctgaaaccgcatcataaaccaactgttagactgaggccccagagccatg 320
Query: 121 taaatcatttaaggttccaagtagcagatttactgctgtcatttcattgtttcagattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatcatttaaggttccaagtagcagatttactgctgtcatttcattgtttcagattgg 380
Query: 181 tttaagaaaatgccaaatcgggatacattattatatcttaagtaacatctccatcccttc 240
|||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 381 tttaagaaaatgacaaatcgggatacagtattatatctgaagtaacatctccatcccttc 440
Query: 241 tgaaaaatac 250
||||||||||
Sbjct: 441 tgaaaaatac 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no153_l14.g1 MSMg01no153_l14.g1 CHROMAT_FILE:
MSMg01no153_l14.g1 PHD_FILE: MSMg01no153_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:10 2005
(507 letters)
>mm_chr6_46978558_46979467
Length = 910
Score = 907 bits (469), Expect = 0.0
Identities = 499/511 (97%), Gaps = 5/511 (0%)
Strand = Plus / Plus
Query: 1 ttcatctaagctaatacagtggcccactgatatttggtaatatg----aaaggcaggtgc 56
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ttcatctaagctaatacagtggcccactgatatttggtaatatgtgtcaaaggcaggtgc 260
Query: 57 tctctttagctttagacaccacaaacaaaagctactcatgcttcagggaagaatccaccc 116
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tctctttagctttagacaccacaaacaaaagctactcctgcttcagggaagaatccaccc 320
Query: 117 tgaccctgctttgtacaccccaacatgtatcaaagcattgatcatggctggttatggagt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaccctgctttgtacaccccaacatgtatcaaagcattgatcatggctggttatggagt 380
Query: 177 ctgtagtaagaccttgggctggccaagagctggaagtcaggcaggacatgaaatagccct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ctgtagtaagaccttgggctggccaagagctggaagtcaggcaggacatgaaacagccct 440
Query: 237 ggaaagtattatctgtactacaaaatctcagtaggaaaaggccaaggcagacagaggatc 296
||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 441 ggaaagtattatctggactacaaaatctcagtaggaaaagaccaaggcagacagaagatc 500
Query: 297 acagtcagccagatagacggtttagcaagagaacttcatgcaaaattatgttttcttcct 356
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 acagtcagccagatagacggtttagcaagagaacttcatgcaaaattat-ttttcttcct 559
Query: 357 ttttcctgatgagactcctcacatgaagcagtatgatacagaaatatgctcttccttccc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttttcctgatgagactcctcacatgaagcagtatgatacagaaatatgctcttccttccc 619
Query: 417 taccttcccgcttctccttctcctcttttctcccctttcttatctcttatcatcaaagcc 476
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 620 taccttcctgcttctccttctccttttttctcccctttcttatctcttatcatcaaagcc 679
Query: 477 cttacaaagattgcctaagttagcatggatc 507
|||||||||||||||||||||||||||||||
Sbjct: 680 cttacaaagattgcctaagttagcatggatc 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 910
Length adjustment: 10
Effective length of query: 497
Effective length of database: 900
Effective search space: 447300
Effective search space used: 447300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
