CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTACTTCCTCAACTAATATTGTCCCAGCAATGCAGAACTACCTAATA
CAACTCCCAAGCTCCTTGCCTGTTGAGGAGTGTATCCACTTAACTTCTTG
AAATCTCCATCTAGAACTACAGTAGGCAAGTCAGACTTGACATGAGCTGT
CAGGAACTCCTGCTTTACCAGGAAACTGTTATACTTCTAGATAGCCACCT
TGTGGCTGGGCTAAGAACCTGTGAACATCTCATATTTCTTTGACCATAAT
CTTTGTTGTTGTTATCAAATCTATTTAGCAACTATTTTGTAGAATAGTCG
TGAAAGCCAGTGAGATGGTTCAGAGGGTAGCCATGCTTATTGTCAAGTCT
GACAACCTGAATTGAATCCTGGGACTCATACTGTAGAAGGAGAGAACTGA
CTCTAGCAACTTGTTCTCTGACCACCACATTTGTACATGTACAGAAATGT
AGTAAAAAATTTTTCTTGAAAAAAGGTTATTTAGTGTTATGTATATTAGG
CATTGTTTTACTAGGATTCAGTGATATACAATTTTTTGTTGTTTTGTTCC
CCAGAGACATACTTTATACAGTTCTGTACATTTGGGAACATGAGCACTGG
CCCAAGTGCAATCT

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTGTTTAGATCTGTACCCTATTTTTAAT
TGGATTATTTGGTTTGTTGATCTCTAGTTTCTTGAATTTTTTTATGTACT
TTGGATATTTATTTGCTATCAGATGTCAAGTTAGTAAAAATATTGTTTTT
TATTCTGTAAGCTGTAGCTTTGTCAAATTGATGGTATCCTTTGCCTTATG
GAAGCTTTTCAGTTTAATGACATGCCATTTATTAATAGTTGATCTTAGTG
CCTGGGATACCTGTGTTCTGTTCACAACGTTCTGTCTCCTGTACTGATGT
GCTCAAGGCCTCCTCACTTTCTCTGCCGTCAGGCTCAGTGTGTCTAGTTT
TATGTTGAGGGTTTTCATCCATTGGATGTGAGTTCTGTCAAGGGATATAA
ATATATGGATCTATTTGCATCTTGTACATGCAGACACCCAGTTTAATCAG
CATTATTTATTGAAAATGTCTTCTTTTTTTTTTCCCTCCCAGGGAATATT
TCTGACTTTCTTATCAAAAATTACGGGTCCCTAGAAATGTGAACTTTATT
CCTGGTTCTTTTTGCTTGAAGCTATGGTGTCTTTTGTATATGTGTATATT
CTGCATGGTGTTACTTT

Query= MSMg01no154_e18.b1 MSMg01no154_e18.b1 CHROMAT_FILE:
MSMg01no154_e18.b1 PHD_FILE: MSMg01no154_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:53 2005
         (577 letters)



>mm_chr6_17819991_17820967
          Length = 977

 Score =  891 bits (461), Expect = 0.0
 Identities = 565/643 (87%), Gaps = 70/643 (10%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttac---ttcctcaa-ctaatattgtcccagcaatgcagaactacctaataca 60
           |||||||||||   ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaattctttacttgttccttaagctaatattgtcccagcaatgcagaactacctaataca 631

                                                                       
Query: 61  actcccaagctccttgcctgttgaggagtgtatccacttaacttcttgaaatctccatct 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 630 actcccaagctccttgcctgttgaggagcgtatccacttaacttcttgaaatctccatct 571

                                                                       
Query: 121 agaactacagtaggcaagtcagacttgacatgagctgtcaggaactcctgctttaccagg 180
           ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 570 agaactatagtaggcaagtcagacttgacatgagctgtcaggaacacctgctttaccagg 511

                                                                       
Query: 181 aaactgttatacttctagatagccaccttgtggctgggctaagaacctgtgaacatctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaactgttatacttctagatagccaccttgtggctgggctaagaacctgtgaacatctca 451

                                                                       
Query: 241 tatttctttgaccataatctttgttgttgttatcaaatctatttagcaactattttgtag 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tatttccttgaccataatctttgttgttgttatcaaatctatttagcaactattttgtag 391

                                                                       
Query: 301 aatagtcgtgaaagccagtgagatggttcagagggtagccatgcttattgtcaagtctga 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aatagtcgagaaagccagtgagatggttcagagggtagccatgcttattgtcaagtctga 331

                                                                       
Query: 361 caacctgaattgaatcctgggactcatactgtagaaggagagaactgactctagcaactt 420
           |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 330 caacctgaattgaatcctgggactcatagtgtagaaggagaaaactgactctagcaactt 271

                                                                       
Query: 421 gttctctgaccaccacatttgta----------------catgt---------------- 448
           |||||||||||||||||||||||                |||||                
Sbjct: 270 gttctctgaccaccacatttgtatatgtgcatgcataagcatgtgtgtgtgtgcgcacac 211

                                                                       
Query: 449 --------------------------------acagaaatgtagtaaaaaatttttcttg 476
                                           ||||||||||||||||||||||||||||
Sbjct: 210 acacacacacacacacacacacacacacacacacagaaatgtagtaaaaaatttttcttg 151

                                                                       
Query: 477 aaaaaaggttatttagtgttatgtatattaggcattgttttactaggattcagtgatata 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aaaaaaggttatttagtgttatgtatattaggcattgttttactaggattcagtgatata 91

                                                      
Query: 537 caatttttt--gttgttttgttccccagagacatactttatac 577
           |||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 90  caattttttttgttgttttgttccccagagacatactttatac 48


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)