Query= MSMg01no156_g15.b1 MSMg01no156_g15.b1 CHROMAT_FILE:
MSMg01no156_g15.b1 PHD_FILE: MSMg01no156_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:32 2005
(314 letters)
>mm_chr6_127313400_127314113
Length = 714
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%)
Strand = Plus / Plus
Query: 5 gaattcttggccagctccagcactaggctccttcccagcccagccggctatcctcctggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggccagctccagcactaggctccttcccagcccagccggctatcctcctggc 264
Query: 65 tatccttgtaagccactatgcagctcaacccctgcccccacctccccttctgggtccacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatccttgtaagccactatgcagctcaacccctgcccccacctccccttctgggtccacc 324
Query: 125 gagttaatcctgtttgcctggtctgtcaatttaaacagctttaaatatgcctcagcaggt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagttaatcctgtttgcctggtctgtcaatttaaacagctttaaatatgcctcagcaggt 384
Query: 185 ctgggtggcagaaccctgatgctccaaaacagagggcttgcatcaaaggaaactggtgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgggtggcagaaccctgatgctccaaaacagagggcttgcatcaaaggaaactggtgga 444
Query: 245 acaggggctgggctacaagagtgtcatttataagcacagaagcaaagcattgtcagaagg 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 acaggggctgggctacaagagtgtcatttaaaagcacagaagcaaagcattgtcagaagg 504
Query: 305 gggtatgg 312
||||||||
Sbjct: 505 gggtatgg 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_g15.g1 MSMg01no156_g15.g1 CHROMAT_FILE:
MSMg01no156_g15.g1 PHD_FILE: MSMg01no156_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:32 2005
(467 letters)
>mm_chr6_127399439_127400305
Length = 867
Score = 841 bits (435), Expect = 0.0
Identities = 460/469 (98%), Gaps = 3/469 (0%)
Strand = Plus / Minus
Query: 1 tcttttaaaaacatcaaaatgcaatccccacagattttaattaggaaacatgacaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcttttaaaaacatcaaaatgcaatccccacagattttaattaggaaacatgacaaggaa 506
Query: 61 ttaaattcgacctttaagagaaaaaaaaaatgaagtgctaagtaactccccacactcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaaattcgacctttaagagaaaaaaaaaatgaagtgctaagtaactccccacactcact 446
Query: 121 ggaaggactctattgaaaataccagcgattattagctttagctgctgggggaaattatct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaaggactctattgaaaataccagcgattattagctttagctgctgggggaaattatcc 386
Query: 181 gagcacaaagatgggcataagcattcagctcacagcatcaggcaaaagcagcagctgaga 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagcacaaagatgggcatcagcattcagctcacagcatcaggcaaaagcagcagctgaga 326
Query: 241 tgtgtgtctatcctaattagaggatgcagggtctgaaaaggccctggagtcgctgcagct 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 tgtgtgtctatcctaattagaggatgcagggtctgaaaaggccctggagccgctgcagcc 266
Query: 301 acattcctggctggggctttccttccaagaatgccacattcaggttttggtcattaccat 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 265 acattcctggctggggctttccttccaggaatgccacattcaggttttggtcatcaccat 206
Query: 361 gtccatttttttt--ctttttttctttctttttttttttttacttaaaaggaaagactag 418
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gtccattttttttttctttttttctttctttttttttttt-acttaaaaggaaagactag 147
Query: 419 gactagagcagggatagtaggaaggactcaggaaagggtgcctgaagct 467
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gactagagcagggatagtaggaaggactcaggaaagggtgcctgaagct 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
