Query= MSMg01no157_g01.b1 MSMg01no157_g01.b1 CHROMAT_FILE:
MSMg01no157_g01.b1 PHD_FILE: MSMg01no157_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:42 2005
(346 letters)
>mm_chr6_90038591_90039337
Length = 747
Score = 640 bits (331), Expect = 0.0
Identities = 343/347 (98%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 1 gccaccatcgaaggtgtagaaatatccacagtgatctgggtcttcccatatataatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 731 gccaccatcgaaggtgtagaaatatccacagtgatctgggtcttcccatatctaatcaat 672
Query: 61 catgaatcaagaatatgtaccaggtgtttgtccatgggccagtctggtggttgcagtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 catgaatcaagaatatgtaccaggtgtttgtccatgggccagtctggtggttgcagtttc 612
Query: 121 tcagtgagattccttctaaaataactctagcttgtgtcaagttgacatgaaagtatgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tcagtgagattccttctaaaataactctagcttgtgtcaagttgacatgaaagtatgtag 552
Query: 181 tacagacaccaagtatatgtggcatgtaattttgtaaacaacatcattttacagaagaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 551 tacagacaccaagtatatgtggcatgtaattttgtaaacaacatcattttacagaaaaaa 492
Query: 241 a-tttatcactggaagtcaagggtgtgaatgaaattattttatactaatttagaacatga 299
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 491 aatttatcactggaagtcaagggtgtgaatgaaatcattttatactaatttagaacatga 432
Query: 300 gatattgtaatgaaagatgttacagaggtaaagggtatcaaattcac 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gatattgtaatgaaagatgttacagaggtaaagggtatcaaattcac 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_g01.g1 MSMg01no157_g01.g1 CHROMAT_FILE:
MSMg01no157_g01.g1 PHD_FILE: MSMg01no157_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:42 2005
(288 letters)
>mm_chr6_89888418_89889105
Length = 688
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1 tctagcctgtcccctcctagctgagcctcagcatctcacaccttcctggttgagcatggg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tctagcctgtcccctcctagctgagcctcagcagctcacaccttcctggttgagcatggg 260
Query: 61 ctaagagaggacccacactctctgatatgcagaattaaaggacactcat-ctatcagaga 119
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 261 ctaagagaggacccacactctctgatatgcagaattaaaggacact-attctatcagaga 319
Query: 120 aggcaggagagagtaaactgtgacaaacttgggacaatctattacaccatgcactgtgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggcaggagagagtaaactgtgacaaacttgggacaatctattacaccatgcactgtgat 379
Query: 180 tgtgttttgcacaatataacaaaacaggcttctttcaagagactggaaattctgtacata 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgcgttttgcacaatataacaaaacaggcttctttcaagagactggaaattctgtacata 439
Query: 240 ctgcagatagcaccaagaatggtcactcatttctgaaacatgttcca 286
||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 440 ctgcagatagcaccaggaaaggtcactcatttctgaaacaggttcca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
