Query= MSMg01no157_g10.b1 MSMg01no157_g10.b1 CHROMAT_FILE:
MSMg01no157_g10.b1 PHD_FILE: MSMg01no157_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:44 2005
(319 letters)
>mm_chr6_53675499_53676217
Length = 719
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattccaaagataaaaatttcattatctaaagatgtcacagctccctcttcttccctac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaagataaaaatttcattatctaaagatgtcacagctccctcttcttccctac 264
Query: 65 catgactcttgtcccatccccaagcttagatgaagagaaactcaaacactcctaaagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgactcttgtcccatccccaagcttagatgaagagaaactcaaacactcctaaagaaa 324
Query: 125 atgtggcattagctactggcctccaactttcatgattctattgtagccccctaggagttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtggcattagctactggcctccaactttcatgattctattgtagccccctaggagttg 384
Query: 185 agattgcaagtgtgttatcacctcctgtactggctgcttttgtgtcaacttggcacaagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agattgcaagtgtgttatcacctcctgtactggctgcttttgtgtcaacttggcacaagc 444
Query: 245 tggaattatcacagacaaaggagcttcagttgagaaaatgcctccacgagatccaactgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaattatcacagacaaaggagcttcagttgagaaaatgcctccacgagatccaactgt 504
Query: 305 aaggcattttctc 317
|||||||||||||
Sbjct: 505 aaggcattttctc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_g10.g1 MSMg01no157_g10.g1 CHROMAT_FILE:
MSMg01no157_g10.g1 PHD_FILE: MSMg01no157_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:44 2005
(277 letters)
>mm_chr6_53770671_53771352
Length = 682
Score = 472 bits (244), Expect = e-137
Identities = 271/282 (96%), Gaps = 5/282 (1%)
Strand = Plus / Minus
Query: 1 cgtgttgtctcaacatctcgcagggtggcaccggga----aa-agtaggtaaaatgtagg 55
|||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 482 cgtgttgtctcaacatcttgcagggtggcaccgggaagagaagagtaggtaaaatgtagg 423
Query: 56 cgcgctgcctctccgccgaagccgccggcgaacccgcctaaaataaaaaggtctctgtct 115
||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 cgccctgcctctgcgccgaagccgccggcgaaccggcctaaaataaaaaggtctctgtct 363
Query: 116 gcaatccccgtttgctcgcccggtaatccacccccgcccccagcctgcgcgccgacccgt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcaatccccgtttgctcgcccggtaatccacccccgcccccagcctgcgcgccgacccgt 303
Query: 176 acagctgtttttaatccctacttttctcacttggcgtccgggctagggctgaccagacgc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acagctgtttttaatccctacttttctcacttggcgtccgggctagggctgaccagacgc 243
Query: 236 ggagccacttattgtttcctcctcccccagcccgggtctgtc 277
||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 242 ggagccacttagtgtttcctcctcccccagccggggtctgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 682
Length adjustment: 9
Effective length of query: 268
Effective length of database: 673
Effective search space: 180364
Effective search space used: 180364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
