Query= MSMg01no161_e14.b1 MSMg01no161_e14.b1 CHROMAT_FILE:
MSMg01no161_e14.b1 PHD_FILE: MSMg01no161_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:43 2005
(461 letters)
>mm_chr6_54481337_54482198
Length = 862
Score = 696 bits (360), Expect = 0.0
Identities = 395/410 (96%), Gaps = 9/410 (2%)
Strand = Plus / Minus
Query: 16 gaatt-cagagctagcattctatacacccctgcctggggcatttgagatgctcaggggag 74
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattccagagctagcattctatagacccctgcctggggcatttgagatgctcaggggag 562
Query: 75 atgtgctccaggggtgagtctaccggactgaagggtagggacccagaagatgtatttggc 134
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtgctccaggggtgagtctacaggactgaagggtagggacccagaagatgtatttggc 502
Query: 135 ggataatgattgctgtgagagtgatcaaggtctgcaataatagcaaatgcaggagtagat 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggataatgattgctgtgagagtgatcaaggtctgcaataatagcaaatgcaggagtagat 442
Query: 195 aatggctgacctgaagccatttaagttgacacctcccctggctcacacagagtcactgca 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggctgacctgaagccatttaagttgacacctcccctggctcacacagagtcactgca 382
Query: 255 ataggaatggtatgacaaatcccgtgaccctagccacttcttggaggggcacatagtctg 314
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ataggaatggtatgacaaatcccgtgaccctggccacttcttggaggggcacatagtctg 322
Query: 315 tatctagagtagacttctaagttcagggtcaagttcagaagtctggtcccagctttttt- 373
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tacctagagtagacttctaagttcagggtcaagttcagaagtctggtcccagc---ttta 265
Query: 374 ---ttgtctaaaactaatctttcataccaagcaagtcctatgagcaactc 420
| || |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 aactggt-taaaactaatctttcatatcaagcaagtcctatgagcaactc 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 862
Length adjustment: 10
Effective length of query: 451
Effective length of database: 852
Effective search space: 384252
Effective search space used: 384252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_e14.g1 MSMg01no161_e14.g1 CHROMAT_FILE:
MSMg01no161_e14.g1 PHD_FILE: MSMg01no161_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:43 2005
(384 letters)
>mm_chr6_54351393_54352176
Length = 784
Score = 677 bits (350), Expect = 0.0
Identities = 371/378 (98%), Gaps = 2/378 (0%)
Strand = Plus / Plus
Query: 6 gccactcctcccacagacaccaaagaaccacttaccacttcttatgagtcaggcagcagg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gccactcctcccacagacaccaaagaaccacttaccacttcttatgagtcaggcagcagg 265
Query: 66 ctccctttggctgagctgacatgaccagaaaggaaaagcatc-gagtctccatcccactc 124
|||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 266 ctccctttggctaagctgacatgaccagaaaggaaaagca-cagagtctccatcccactc 324
Query: 125 cctgtcttctctccatccatggagaaaggctatgctctcgggcacactgcacattcatag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctgtcttctctccatccatggagaaaggctatgctctcgggcacactgcacattcatag 384
Query: 185 ctagagaggaggctgggctagacctctttgtgcttccacctttttacaatgcaaatatga 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctagagaggaggctgggctagacatctttgtgcttccacctttttacaatgcaaatatga 444
Query: 245 gaacattttattcccagatatggagtaattattgcagtgtaggtaggtgccaggtgattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaacattttattcccagatatggagtaattattgcagtgtaggtaggtgccaggtgattt 504
Query: 305 agaatttactgaaaacacgggtattcattttgtgacagcctatgtgatgttggaaccagg 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 agaatttactgaaaacacgggtattcaacatgtgacagcctatgtgatgttggaaccagg 564
Query: 365 atacctaatcccaaggga 382
||||||||||||||||||
Sbjct: 565 atacctaatcccaaggga 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
