Query= MSMg01no163_a09.b1 MSMg01no163_a09.b1 CHROMAT_FILE:
MSMg01no163_a09.b1 PHD_FILE: MSMg01no163_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:31 2005
(316 letters)
>mm_chr6_113116715_113117429
Length = 715
Score = 538 bits (278), Expect = e-157
Identities = 305/314 (97%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 3 cggaattctcatctctccagtgtggatttttattttcttccctttgggtaagtgttctag 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 203 cggaattctcatctcttcagtgtggatttttattttcttccctttgggtaagtgctctag 262
Query: 63 aaagaggtatcctgcccttccctgagtcctcacaaaagagtagagcactgttactgtggt 122
|||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 263 aaagaggtatcctg-gcttccccgagtcctcacaaaagagtggagcactgttactgtggt 321
Query: 123 cagaatactgcatgcagaatcaagactgtgccagagggagtatccagactgccgctgctg 182
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 cagaataccgcatgcagaatcaagactgtgccagagggagtatccagagtgccgctgctg 381
Query: 183 ctgtctccttttgccgtgtcacagaaccccggtttcatttgcgttggcaacgtgcccagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctgtctccttttgccgtgtcacagaaccccggtttcatttgcgttggcaacgtgcccagt 441
Query: 243 taatgtttctagcctctttcagttacatgtgccatgtgactcagttctgtggcatttcca 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 taatgtttctagcctctttcagttacatgtgccaggtgactcagttctgtggcatttcca 501
Query: 303 ggcagcttcaagtg 316
||||||||||||||
Sbjct: 502 ggcagcttcaagtg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_a09.g1 MSMg01no163_a09.g1 CHROMAT_FILE:
MSMg01no163_a09.g1 PHD_FILE: MSMg01no163_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:31 2005
(287 letters)
>mm_chr6_113189847_113190533
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Minus
Query: 1 tcaggttctgagggcatgagcttaagtggcccatgatccaaagaggcccctgggagtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcaggttctgagggcatgagcttaagtggcccatgatccaaagaggcccctgggagtgag 336
Query: 61 tgacaagcaattctgtgatcatcattcaaggctgggaagaaacatgatgctggaccgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgacaagcaattctgtgatcatcattcaaggctgggaagaaacatgatgctggaccgtgg 276
Query: 121 gctctatattaactcacgtgtggcatgcttcaggtggtacctaagcccgttagcctcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gctctatattaactcacgtgtggcatgcttcaggtggtacctaagcccgttagcctcact 216
Query: 181 gcacagaagactgtggagtcacagggaggctgggcacatagtgagaccttgtcccaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gcacagaagactgtggagtcacagggaggctgggcacatagtgagaccttgtcccaaaaa 156
Query: 241 acaaagcatcagtaactgttgctttaggttactattatagcattaa 286
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 155 acaaagcaacagtaactgttgctttaggttactattatagcattaa 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
