Query= MSMg01no170_j01.b1 MSMg01no170_j01.b1 CHROMAT_FILE:
MSMg01no170_j01.b1 PHD_FILE: MSMg01no170_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:33 2005
(318 letters)
>mm_chr6_45485692_45486409
Length = 718
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattccagtataaaagtccccagtgaaaaggtgtcacagatgaaatttactttagtggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtataaaagtccccagtgaaaaggtgtcacagatgaaatttactttagtggt 264
Query: 65 ttacaggtttttgttcgcaacttacaaatgctatgtcagagctaagtaagcctcccctga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttacaggtttttgttcgcaacttacaaatgctatgtcagagctaagtaagcctcccctga 324
Query: 125 tcttccggttcttataaaagtaaaatcataaattctttaaaactctggcaaaattacgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttccggttcttataaaagtaaaatcataaattctttaaaactctggcaaaattacgtc 384
Query: 185 aagaaaaacctttattaaaaaaaaaaggtacaaggatttagagagatggctcagttgtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagaaaaacctttattaaaaaaaaaaggtacaaggatttagagagatggctcagttgtta 444
Query: 245 agaggatgtgtagtgctaaaagtgaacccgtgtttgatttcaacatctacaagctgtctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaggatgtgtagtgctaaaagtgaacccgtgtttgatttcaacatctacaagctgtctc 504
Query: 305 acaagcatctgta 317
|||||||||||||
Sbjct: 505 acaagcatctgta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_j01.g1 MSMg01no170_j01.g1 CHROMAT_FILE:
MSMg01no170_j01.g1 PHD_FILE: MSMg01no170_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:33 2005
(276 letters)
>mm_chr6_45581368_45582043
Length = 676
Score = 482 bits (249), Expect = e-140
Identities = 270/277 (97%), Gaps = 2/277 (0%)
Strand = Plus / Minus
Query: 1 gagcctctataggctaagcttctcatccctcatccccaactctgaacccattgtctcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gagcctctataggctaagcttctcatccctcatccccaactctgaacccattgtctcact 249
Query: 61 gctcatcccctctgcttccaggttt-tcaacaatcttccacaatttccttgtcttagtca 119
|||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 248 gctcatcccctctgcttcca-gtttatcaacaatcttccacaatctccttgtcttagtca 190
Query: 120 gggtttgtattagtgtgcaaaacatcataactaagaagaaaattgtggaggaaagggttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gggtttgtattagtgtgcaaaacatcataactaagaagaaaattgtggaggaaagggttt 130
Query: 180 attcacctacactttcacactgttgttcatcactgaaggaagtcaggactagaattcacg 239
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 129 attcacctatactttcacactgctgttcatcactgaaggaagtcaggactagaattcaca 70
Query: 240 cagagcaggaacttggaggcaggacctgatgctgctt 276
||| |||||||||||||||||||||||||||||||||
Sbjct: 69 cagggcaggaacttggaggcaggacctgatgctgctt 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
