Query= MSMg01no171_l24.b1 MSMg01no171_l24.b1 CHROMAT_FILE:
MSMg01no171_l24.b1 PHD_FILE: MSMg01no171_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:02 2005
(320 letters)
>mm_chr6_148904809_148905528
Length = 720
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Minus
Query: 5 gaattctcttatgtttgaacctgaccctgaacttctgctcttcataattactgtatagcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattctcttatgtttgaacctgaccctgaacttctgctcttcataattactgtatagcc 604
Query: 65 caggcaagcttggaatttgtgacaatcctccagtgtcagccacctgattgttggaattat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caggcaagcttggaatttgtgacaatcctccagtgtcagccacctgattgttggaattat 544
Query: 125 agacatgagccatcatgctcagctcttctcccttaatttagcgtggtgttgcaaccacct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agacatgagccatcatgctcagctcttctcccttaatttagcgtggtgttgcaaccacct 484
Query: 185 attggagatagtgtcagatcccagaggtggaagttcatcactaggccccaatggcttcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 attggagatagtgtcagatcccagaggtggaagttcatcactaggccccaatggcttcaa 424
Query: 245 ctatggttttgctcaatcactgccagtcagtgttttataatgtctcatttacaactaatt 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 423 ctatggttttgctcaatcactgccagtcagtgttttagaatgtctcatttacaactaatt 364
Query: 305 tacttaaatagctct 319
|||||||||||||||
Sbjct: 363 tacttaaatagctct 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_l24.g1 MSMg01no171_l24.g1 CHROMAT_FILE:
MSMg01no171_l24.g1 PHD_FILE: MSMg01no171_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:02 2005
(284 letters)
>mm_chr6_148758213_148758893
Length = 681
Score = 526 bits (272), Expect = e-154
Identities = 280/284 (98%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 1 ccactgcataggttttcaaaaaaaattcagaaaattcgaagtattcttctgtgacatttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ccactgcataggttttcaaaaaaaattcagaaaattcgaagtattcttttgtgacatttc 260
Query: 61 ctgggcttccataccttaaaattcaaagaggaaacatctaagtactgtgacatttaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggcttccataccttaaaattcaaagaggaaacatctaagtactgtgacatttaaaag 320
Query: 121 caaagcacacttgctattttaaatgcagatactgagagatatattctactgggccataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagcacacttgctattttaaatgcagatactgagagatatattctactgggccataaa 380
Query: 181 gctaacactttctcttttcccacaagatacaataggaatcaggagaaactaaagactcta 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gctaacactttctcttttcccacaagatacaataggaatcaggagaaac---agactcta 437
Query: 241 gagcacagctagcattttggaaggaaacttctaacttctaaacc 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gagcacagctagcattttggaaggaaacttctaacttctaaacc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 681
Length adjustment: 9
Effective length of query: 275
Effective length of database: 672
Effective search space: 184800
Effective search space used: 184800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
