TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAACACTTCTGGGCAGAGAGAGAGAGGGGGCAGGGGGGAGGGGGAA
NTATNTTTTCGACTTATGTTCCCTCAAGAGACGTGTCCGTGAAGTGCACC
CCCCCGACTCGTCCCGATTATGGCGTTGGAATATGTTTGTCTCGCTTCTA
GACACATACTCACTGGCTGGGTGGCATAAATCCGGCGCTATGCGGTTGAT
ACGCTCCCACTGGGACCGTTGTGAATGTTCTTTATTCGTTCTTCCTTCCG
CCTTGTAGTCTGCTCCCGACTTCCCGCTTTTTTTTTTTGCTTCACGCCTC
CCACCCTTACCCGCCTAGAGAATTTTTAAGATGAATTCCCCGAGGACAAG
AGCCCGTTGTGTATTTAATATGACGCCACATTTTCGATTTCGGTTCCCCT
CTTAATAAAAAAAAAAAAAAATACCCTGTTGGGGGGGGGTGGGGCTCCCC
TCTTTGTTCCCCTTTCTGCCCCCCGAATACCTTTTCCCCTGTGTCCAGGT
CTCTTCCCTAGTTAGAAATATTTTCCTAGATGCTCCAATGCGTTGCCCTC
CCTGTATTTCGATTGTCACCACCTACTTGTTTATTACTCACCCTTCCCCA
CCCCACGGCATTTTTTACCCCACACTTCATTTTAAACAGCTTCTGCACGC
CCCGGAGAGCCACCCCTTTTACTTTTTTACCCATGCGTTTCTTATGTACC
CCGGCTATTAGCGCCCGATATTTGTTTCTTGCGCCCCCACTTATTCTCTT
GCGCCGTTCAGTACATTAATCACCCACCCAACTCGAATATACCCCCGATA
CTGCCCCTGCTTTCACCCTCC

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAGGGAAGAAAATGAGAGTATGAG
GCTGTGTCTTTGGAGATAATATTCCCATTCTGGCCACACTTTTTCTTTTC
TTATTGCTTCCTAGCAACCACAAAGTGAGCAGCTTGCTCTAGTATGTATT
TCTGGCCATGATATGCTACCTCATCACAGTCCCAAAGATGATGAAGCCAA
CAAACCAAGGATCAAGCTCCTCAAACCAAGAGTGTCTCTACACTTTATGG
GATACTTAGGCACTTTTAAAAACATGAGCAGAAAGCTCACTGATATATTA
GCATAATGTTACTAGTAAATGCTATTATTCTAAACTATATGGAAAATATA
CTTATTTGATGGGGTCTTTTTGTTTAAAAAATATTTAAAAGCTAAATATG
CCAGAAAAAAGTGTGAATATATTTGGATCTAAATCAAACAAAATTATTCC
TAGAACTCTTTGTTTGCCAAGTTAAATATCTAATTTCATTATTTTATTCT
GATTTAAAATAGTACCATATACAAATACAATGTTATAATAACTTAAATTC
AAGTTAAATAAAATAAATTGAAACGCTGTCTTGTTCAAAGGAACTGGGAC
CAAAACTATGTATTTCATATGAGGGAGAGGGGAATTGAGGAGTAAAATTT
CACACATTTCAAAAATATTTCATCTTTCTTN

Query= MSMg01no173_p03.g1 MSMg01no173_p03.g1 CHROMAT_FILE:
MSMg01no173_p03.g1 PHD_FILE: MSMg01no173_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:42 2005
         (656 letters)



>mm_chr6_104458802_104459857
          Length = 1056

 Score = 1220 bits (631), Expect = 0.0
 Identities = 649/655 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttagggaagaaaatgagagtatgaggctgtgtctttggagataatattcccattctggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct: 855 ttagggaagaaaatgagagtatgaggctgtgtctttggagataatattaggattctggcc 796

                                                                       
Query: 61  acactttttcttttcttattgcttcctagcaaccacaaagtgagcagcttgctctagtat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acactttttcttttcttattgcttcctagcaaccacaaagtgagcagcttgctctagtat 736

                                                                       
Query: 121 gtatttctggccatgatatgctacctcatcacagtcccaaagatgatgaagccaacaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtatttctggccatgatatgctacctcatcacagtcccaaagatgatgaagccaacaaac 676

                                                                       
Query: 181 caaggatcaagctcctcaaaccaagagtgtctctacactttatgggatacttaggcactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caaggatcaagctcctcaaaccaagagtgtctctacactttatgggatacttaggcactt 616

                                                                       
Query: 241 ttaaaaacatgagcagaaagctcactgatatattagcataatgttactagtaaatgctat 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 615 ttaaaaacatgagcagaaagctcactgatatattagcataatgttacaagtaaatgctat 556

                                                                       
Query: 301 tattctaaactatatggaaaatatacttatttgatggggtctttttgtttaaaaaatatt 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 555 tattctaaactatatggaaaatatacttatttgatggagtctttttgtttaaaaaatatt 496

                                                                       
Query: 361 taaaagctaaatatgccagaaaaaagtgtgaatatatttggatctaaatcaaacaaaatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taaaagctaaatatgccagaaaaaagtgtgaatatatttggatctaaatcaaacaaaatt 436

                                                                       
Query: 421 attcctagaactctttgtttgccaagttaaatatctaatttcattattttattctgattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attcctagaactctttgtttgccaagttaaatatctaatttcattattttattctgattt 376

                                                                       
Query: 481 aaaatagtaccatatacaaatacaatgttataataacttaaattcaagttaaataaaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaaatagtaccatatacaaatacaatgttataataacttaaattcaagttaaataaaata 316

                                                                       
Query: 541 aattgaaacgctgtcttgttcaaaggaactgggaccaaaactatgtatttcatatgaggg 600
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 315 aattgaaacgctgtcttgttcaaaggaactgggcccaaaactatgtatttcatatgaggg 256

                                                                  
Query: 601 agaggggaattgaggagtaaaatttcacacatttcaaaaatatttcatctttctt 655
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agaggggaattgaggagtaaaatttcacacatttcaaaaatatttcatctttctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)