Query= MSMg01no175_m04.b1 MSMg01no175_m04.b1 CHROMAT_FILE:
MSMg01no175_m04.b1 PHD_FILE: MSMg01no175_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:54 2005
(513 letters)
>mm_chr6_46226809_46227721
Length = 913
Score = 922 bits (477), Expect = 0.0
Identities = 504/513 (98%)
Strand = Plus / Plus
Query: 1 tacctgtggtgaataatagtgactattacttatgaactgccaccattccatacccctgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tacctgtggtgaataatagtgactattacttatgaactgccaccattccataccggtgat 260
Query: 61 agagccaacatataacaaattaccaatagacttagattaataactaatgttagtttcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagccaacatataacaaattaccaatagacttagattaataactaatgttagtttcatg 320
Query: 121 ttataaagagtataaagttcttcagacgcacatcatacatttttatggtgaagaattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttataaagagtataaagttcttcagacgcacatcatacatttttatggtgaagaattttc 380
Query: 181 ccagtaagaatcaaggcaccatctccagctccttccacttcatttttcttcttacccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtaagaatcaaggcaccatctccagctccttccacttcatttttcttcttacccttt 440
Query: 241 acttctaagccctcatgaccctgtttcttaaagttatatgatcttttctcccagtgtcac 300
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 acttctaagccctcatgatcctgtttcttaaagttatatgatcttttctcccagggtcac 500
Query: 301 ctgtatgtaaaagctcgctaggttattcatcacagagtagggcacaccccccatatcata 360
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 501 ctgtatgtaaaagctcgctaggttattcatcacagagtagggcacagcctagatatcata 560
Query: 361 tattcattggagcctctgatgaagccccaaagctatcttccttttaaaatacttttgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattcattggagcctctgatgaagccccaaagctatcttccttttaaaatacttttgtga 620
Query: 421 aagtatttcttttccctttatatgaacttaccttcttattattatatgcactcagctgat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 aagtatttcttttccctttatatgaacttaccttcttattattatatgcactcacctgat 680
Query: 481 tatttgaatcctgattgcacccagtgattcaga 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 tatttgaatcctgattgcacccagtgattcaga 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_m04.g1 MSMg01no175_m04.g1 CHROMAT_FILE:
MSMg01no175_m04.g1 PHD_FILE: MSMg01no175_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:55 2005
(338 letters)
>mm_chr6_46366854_46367591
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 331/340 (97%), Gaps = 5/340 (1%)
Strand = Plus / Minus
Query: 1 ctgaagaagtaacagaatgaaaggagaccccaatgcaagaatata--acacccacgagat 58
||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 725 ctgaagaagtaacagaatgaaaggagaccccaatgcaagaatataagaaa---acgagat 669
Query: 59 gagggccctgatactgtttgtatggacatggcatggccttagcactaataaactcatagc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gagggccctgatactgtttgtatggacatggcatggccttagcactaataaactcatagc 609
Query: 119 agctacagatgccttcattgagctttctaaagaaaaagcccataagcattcagacacaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agctacagatgccttcattgagctttctaaagaaaaagcccataagcattcagacacaga 549
Query: 179 tgtgggagggatggcatcgttgtcttcagtgatgtagtcactggtgatttatgcatgcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tgtgggagggatggcatcgttgtcttcagtgatgtagtcactggtgatttatgcatgcac 489
Query: 239 cagtgcaaagctccaagtccatgtctaggtagacaaccctagttaaacacagtgattcac 298
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 488 cagtgcaaagctccaagtccatgtctgggcagacaaccctagttaaacacagtgattcac 429
Query: 299 agagccaatatacacaatgacaacaacaagaaaaaaacac 338
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 428 agagccaatatacacagtgacaacaacaagaaaaaaacac 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
