Query= MSMg01no183_c16.b1 MSMg01no183_c16.b1 CHROMAT_FILE:
MSMg01no183_c16.b1 PHD_FILE: MSMg01no183_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:06 2005
(186 letters)
>mm_chr6_19702590_19703174
Length = 585
Score = 327 bits (169), Expect = 3e-94
Identities = 178/181 (98%), Gaps = 1/181 (0%)
Strand = Plus / Minus
Query: 5 gaattccacccttgtaacagaagaacttatctactacagttaacttaaaagaatgagtgt 64
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 309 gaattccacccttgtaaaagaagaacttatctactacagttaactgaaaagaatgagtgt 250
Query: 65 ggtctgcattaaatatctgcaataaaatacacaactaaagcaacttaaggatggtaggaa 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggtctgcattaaatat-tgcaataaaatacacaactaaagcaacttaaggatggtaggaa 191
Query: 125 gggagaaagggagaactgaagggagaaaggaaggaagaaaggaaggaagggagggaggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gggagaaagggagaactgaagggagaaaggaaggaagaaaggaaggaagggagggaggaa 131
Query: 185 g 185
|
Sbjct: 130 g 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 585
Length adjustment: 8
Effective length of query: 178
Effective length of database: 577
Effective search space: 102706
Effective search space used: 102706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no183_c16.g1 MSMg01no183_c16.g1 CHROMAT_FILE:
MSMg01no183_c16.g1 PHD_FILE: MSMg01no183_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:06 2005
(291 letters)
>mm_chr6_19688411_19689101
Length = 691
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%)
Strand = Plus / Plus
Query: 1 attatccactaaatcctcatacttcacgttttttagatgtgtttgggctatcatttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatccactaaatcctcatacttcacgttttttagatgtgtttgggctatcatttttta 260
Query: 61 gcagccaagtgtgaaacggttaggaatatgtaaataatgaattagttaggattgaactaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagccaagtgtgaaacagttaggaatatgtaaataatgaattagttaggattgaactaa 320
Query: 121 ctcatcatgaattgagattaattaaattacttagttttgcatcatcttgacaaaaccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatcatgaattgagattaattaaattacttagttttgcatcatcttgacaaaaccaca 380
Query: 181 gggagtaaagtagttaaatacagcaaggaaataagctgtgagtgaaatggagaacaagga 240
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 gggagtaaagtagttaaacacagcaaggaaataagctgtgaatgaaatggagaacaagga 440
Query: 241 agataatcgatcaaccaggaaaattgtctacagcaatcatgatttataatt 291
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tgataatcgatcaaccaggaaaattgtctacagcaatcatgatttaaaatt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
