CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTATTTAGTTCTCTACCCCATTTCTAGGTTATTGGTTTTCTGGA
GTCTAACTTCTTGTGTTCTTTGTATATATTGGATATTAGCCCTCTATTGG
ATATAGGGTTGATAAAGATGTTTTCCCAATTTGTTGGTTGCCGTTTTGTC
CTATTGACAATGTCCTTTGCCTTCCAGAAGCTTTGTAATTTTATGAGGAT
CCATTTGTCAATTCTTGATTTTAGAGCATAGGCTATTGGTGTTCTGTTCC
GGAAATTTTCCCCTGTGCCCATGTGCTCGAGGCTCTTTTCCACATTCTTT
TCTATTAGTTTCAGTGTACCTGGTTTTATGTGGAGGTACTTGTATCCACT
TGGGCTTGAGCCCCGCACAAGGAGATAAGAATGGAGAGGCCCTTGGTCTT
GCGAAGATCATATTCCTTATTACAGGGGACTGCCAGGGCCCGGAAGCAGG
AGTGGGTGCGTTTGGGATCAGGGCATGGGGAGGGTATCGGNATTCTTTTA
GCACTTTTTTATTGTTATTTTTTTACAATCCCCCCCCCCTTTTTCTCATT
TTTTTCCTTTCTTCCCCCCTTCTTTTCCCCACTAACATTCCCCCGGCTCC
CCCCCCTTTGTTTTTTCCCTCCCTTTTTTTTTCCCTG

CCCCACTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCACACTATCCTTTCT
TACCTGCTCTCTGTACCAAACTAGCCACCATTTGTCGCTAGTTCTTCGTT
TATATGAGGGAGATTCAGGTGCCCTGATGTCTACTTAAAAAATACCTTTG
ATTCTCCCAATATCTCACATCTGTACTTTACTAAAACAATATGGTTACAG
GCCCTTCATTCTCTTTTCAACAGCAAGCACTTCTTTTTAGATATACTTAC
TAAAGGAAGAAATAAGTGGAAAACTTTAGAAACAAATTTTATCTCATCCT
TATTCTTAGGGGATGGCATTATTTTCATTTCTAGAATTTTATAAAAACCT
CAAGAATTGATGCATTAAAAAACTCTAGGAATGATGGGAAGGTAAAGATT
GTAATATGTAGTCACAGTCCTGAGGAAGCACTATTTCATCATCTGATAAA
TCTTCATAGGTGCTTCCCTTACTAGCAATTACAAAGATGAAATCAATTAA
TTATTAACCACAGGTACAGCATGTTAGACAAAACACTGATAAACAGTGTA
GAAAAGAGAGATAGCTGAGAAAAAGGTTTTCATCTATGACCATTCATGTA
GACAATCTATGCATTAAATAGCAATCCAAGAGTAGACTTTGAGAGTCA

Query= MSMg01no185_g19.g1 MSMg01no185_g19.g1 CHROMAT_FILE:
MSMg01no185_g19.g1 PHD_FILE: MSMg01no185_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:07 2005
         (570 letters)



>mm_chr6_16775527_16776497
          Length = 971

 Score =  990 bits (512), Expect = 0.0
 Identities = 542/552 (98%), Gaps = 1/552 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  gtttatatgagggagattcaggtgccctgatgtctacttaaaaaatacctttgattctcc 79
           ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 220 gtttatatgagggagattcaggtgccctgatgtctgcttaaagaatacctttgattctcc 279

                                                                       
Query: 80  caatatctcacatctgtactttactaaaacaatatggttacaggcccttcattctctttt 139
           ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 280 caatatctcacatctatactttactaaaacaatctggttacaggcccttcattctctttt 339

                                                                       
Query: 140 caacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaacttt 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caacagcaagcacttctttttagatatacttactaaaggaagaaataagtggaaaacttt 399

                                                                       
Query: 200 agaaacaaattttatctcatccttattcttaggggatggcattattttcatttctagaat 259
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 400 agaaataaattttatctcatccttattcttaggggatggcattattttcatttctagaac 459

                                                                       
Query: 260 tttataaaaacctcaagaattgatgcatt-aaaaaactctaggaatgatgggaaggtaaa 318
           |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 460 tttatacaaacctcaagaattgatgcattaaaaaaattctaggaatgatgggaaggtaaa 519

                                                                       
Query: 319 gattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatcttca 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gattgtaatatgtagtcacagtcctgaggaagcactatttcatcatctgataaatcttca 579

                                                                       
Query: 379 taggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccacaggta 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 taggtgcttcccttactagcaattacaaagatgaaatcaattaattattaaccacaggta 639

                                                                       
Query: 439 cagcatgttagacaaaacactgataaacagtgtagaaaagagagatagctgagaaaaagg 498
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cagcatgttagacaaaacactaataaacagtgtagaaaagagagatagctgagaaaaagg 699

                                                                       
Query: 499 ttttcatctatgaccattcatgtagacaatctatgcattaaatagcaatccaagagtaga 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttttcatctatgaccattcatgtagacaatctatgcattaaatagcaatccaagagtaga 759

                       
Query: 559 ctttgagagtca 570
           ||||||||||||
Sbjct: 760 ctttgagagtca 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space:   538160
Effective search space used:   538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)