CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCCTCTATGGACCTGGAGGGCATCATCCTGACTGAGGTAACACA
ATCACAAAGGAACTCACACAATACGTACTCACTGATAAGTGGATATTAGC
CCAAAAATTAGGATACCCAAGATATAAGATACAATTTACTAAACGCATGA
AACTCAAGAAGAATGAAAACCAAAGTGTGGACACTTTGCCCCTTCTTAGA
ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAATTTGGAGC
TGTGACTAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCATC
CCATAATCAGCTTCCAAACGCTGACACCACTGCATACACTAGCAAGATTT
TATCGAAAGGACCCAAATATGGCTGTCTCTTGTGAGACTATGCCGGGGCC
TAGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAC
GGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCT
GCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCT
CTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACT
GGAAAGAGAGCGACATTGGACACTCAAACTTTATATGCCCCAGTACAGGC
GTACGCCAGGGCCAAAAAAATGGGATGGGGTGGGGTAGGGAAGTCGACTT
AAACAC

TCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTCCACGTTTGTTTTCAGATATT
ATTATTCCCTGTATCTTTCTTCTGGCTCTTTCTAATGATTCATTTCTTTT
ATCATTTGTTTGTACGTATGCATATAATATGTAGATGTCCATGAAATATT
GTCTTATTTTTATCTTCTCAAAGAAAATGTGTATATAATATGTTTTAATA
TACTCTGTTGCATATAAAATAAAAATGAAATTTTTATCAGTTCAATTTAC
CTTTATATACCTTATATTGATGTTTCCCTTAATATGTAAAACTTTAAAAT
GTATTATTTCATTATTTCCTCTGTAATTATTTTAAATTGTATGTTCTTTC
TTTAAAGGTCGGTTGCTTTAAGTACCTAGAAACTTGAACCACAAATTTAA
TCAGAAAATAATACTTTAATCCTAGCTAATCCACATTATTGACCTTCTGT
GCCTGCAGCAACAACAATAGCTGAATGTCTCCTGTATAATCTCTTGTGTA
GACCCACAGACTCACTGGCAAAGGCTGCGCCAGAGATTAACTGCCCTCCT
TTGAGATGGTAGTTTGCTGATTTTTAGGAGGAGACTTTAGAGGGTCTCGT
TTAATCCTTTCAAAGACAAGCTGGTTGTATCCATCTTGTCTAATTTGTAA
AATGAAACTAGGTCAGATCAATTATAGATAGCTGTGN

Query= MSMg01no188_b06.g1 MSMg01no188_b06.g1 CHROMAT_FILE:
MSMg01no188_b06.g1 PHD_FILE: MSMg01no188_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:36 2005
         (659 letters)



>mm_chr6_8308317_8309372
          Length = 1056

 Score = 1220 bits (631), Expect = 0.0
 Identities = 651/659 (98%), Gaps = 3/659 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctccacgtttgttttcagatattattattccctgtatctttcttctggctctttctaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccacgtttgttttcagatattattattccctgtatctttcttctggctctttctaat 260

                                                                       
Query: 61  gattcatttcttttatcatttgtttgtacgtatgcatataatatgtagatgtccatgaaa 120
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 261 gattcatttcttttatcatttgtttgtttgtatgcatataatatgtagatgtccatgaaa 320

                                                                       
Query: 121 tattgtcttatttttatcttctcaaagaaaatgtgtatataatatgttttaatatactct 180
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 321 tattgtcttatttttatcttctcaaagaaaatgtgtatata---tgttttaatatactct 377

                                                                       
Query: 181 gttgcatataaaataaaaatgaaatttttatcagttcaatttacctttatataccttata 240
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 378 gttgcatataaaataaaaatgaaattttcatcagttcaatttacctttatataccttata 437

                                                                       
Query: 241 ttgatgtttcccttaatatgtaaaactttaaaatgtattatttcattatttcctctgtaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgatgtttcccttaatatgtaaaactttaaaatgtattatttcattatttcctctgtaa 497

                                                                       
Query: 301 ttattttaaattgtatgttctttctttaaaggtcggttgctttaagtacctagaaacttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttattttaaattgtatgttctttctttaaaggtcggttgctttaagtacctagaaacttg 557

                                                                       
Query: 361 aaccacaaatttaatcagaaaataatactttaatcctagctaatccacattattgacctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaccacaaatttaatcagaaaataatactttaatcctagctaatccacattattgacctt 617

                                                                       
Query: 421 ctgtgcctgcagcaacaacaatagctgaatgtctcctgtataatctcttgtgtagaccca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctgtgcctgcagcaacaacaatagctgaatgtctcctgtataatctcttgtgtagaccca 677

                                                                       
Query: 481 cagactcactggcaaaggctgcgccagagattaactgccctcctttgagatggtagtttg 540
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cagactcactggcaaaggctgtgccagagattaactgccctcctttgagatggtagtttg 737

                                                                       
Query: 541 ctgatttttaggaggagactttagagggtctcgtttaatcctttcaaagacaagctggtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 738 ctgatttttaggaggagactttagagggtctcgtttaatcctttcaaagacaagctgttt 797

                                                                      
Query: 601 gtatccatcttgtctaatttgtaaaatgaaactaggtcagatcaattatagatagctgt 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtatccatcttgtctaatttgtaaaatgaaactaggtcagatcaattatagatagctgt 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1056
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1046
Effective search space:   678854
Effective search space used:   678854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)