Query= MSMg01no190_b05.b1 MSMg01no190_b05.b1 CHROMAT_FILE:
MSMg01no190_b05.b1 PHD_FILE: MSMg01no190_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:12 2005
(671 letters)
>mm_chr6_111856096_111857166
Length = 1071
Score = 1127 bits (583), Expect = 0.0
Identities = 616/627 (98%)
Strand = Plus / Minus
Query: 41 tgcccagaccactagcaaactcaggttatacctcatactagcagcaagtcattttatctt 100
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 754 tgcccagaccaccagcaaactcaggttataccttatactagcagcaagtcattttatctt 695
Query: 101 tgccagggatttaagactcctgtccctgtgcactgtcagcctctggctcattcttcttgt 160
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgccagggatttaagattcctgtccctgtgcactgtcagcctctggctcattcttcttgt 635
Query: 161 gtcttattcatgctgttccatgctaggctttatttggaaggcaggtgtctgttacctggc 220
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 634 gtcttattcatgctgttccatgctaggctttatttggaaggcaagtgtctgttccctggc 575
Query: 221 attatccttggttcttactcaaggcctgtgtacatgggagacctggttgaagtttagaag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 attatccttggttcttactcaaggcctgtgtacatgggagacctggttgaagtttagaag 515
Query: 281 ggttagtagatcagagcagcctacaaggtctgtccagtccattaacactcccaagtgtat 340
||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||
Sbjct: 514 ggttagtagatcagagcagcctacaaggtctgtccagcccagtaagagtcccaagtgtat 455
Query: 341 gctctgaaagttccttagactgccatggaacttgtcaatgtcagcttccttccgactctt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gctctgaaagttccttagactgccatggaacttgtcaatgtcagcttccttccgactctt 395
Query: 401 ctctccctcatctttctgccacattccccatcctgtgtttgattttctctgcagatcatt 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctctccctcatctttctgccacattccccatcctgtgtttgattttctctgcagatcatt 335
Query: 461 ttgtcctgtccaatcttgttcttttgtactagaggacctcacctttcataaaggtcacac 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttgtcctgtccaatcttgttcttttgtactagaggacctcacctttcataaaggtcacac 275
Query: 521 attctcaaaaggctcagaaattcaaagtagcacctgttaggatttgaatataaaatgtca 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 attctcaaaaggctcagaaattcaaagtagcacctgttaggatttgaatataaaatgtca 215
Query: 581 accaaaggcctgtagttttgaattcttggtacccacttggtggcactggttttaagggtt 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 214 accaaaggcctgtagttttgaattcttggtacccacttggtggcactggttttaaatgtt 155
Query: 641 atggaatttgggggacatggagccttg 667
|||||||||||||||||||||||||||
Sbjct: 154 atggaatttgggggacatggagccttg 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_b05.g1 MSMg01no190_b05.g1 CHROMAT_FILE:
MSMg01no190_b05.g1 PHD_FILE: MSMg01no190_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:12 2005
(263 letters)
>mm_chr6_111706972_111707635
Length = 664
Score = 426 bits (220), Expect = e-124
Identities = 253/264 (95%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 1 caaagagcagagaacgatccctgaatcagagctggagtgatgcattggaccatcagttat 60
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagagcaaagaaagatccctgaatcagagctggagtgatgcattggaccatcagttat 260
Query: 61 ttcatatacagaaacaaggtaaagttagagggcctgctgggaaataaaatattggcttat 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 261 ttcatatacagaaacaaggtaaagttaaagggcctgctgggaaataaaatattggtttat 320
Query: 121 ctagaggggagcaaaagccctacatggctggaagccatgatttgtggccatctatgcctc 180
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagaggggcgcgaaagccctacatggctggaagccatgatttgtggccatctatgcctc 380
Query: 181 atggagccacaaacacaaagttcaggctatcattttttt-cctatttccggaaaatttgt 239
|||||||||||||||||||||| |||||||||||||||| ||||| | |||||||||||
Sbjct: 381 atggagccacaaacacaaagtttaggctatcattttttttcctatggctggaaaatttgt 440
Query: 240 ttcctttatttgtaagggaacatg 263
||||||||||||||||||||||||
Sbjct: 441 ttcctttatttgtaagggaacatg 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 664
Length adjustment: 9
Effective length of query: 254
Effective length of database: 655
Effective search space: 166370
Effective search space used: 166370
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
