Query= MSMg01no191_e01.b1 MSMg01no191_e01.b1 CHROMAT_FILE:
MSMg01no191_e01.b1 PHD_FILE: MSMg01no191_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:47 2005
(323 letters)
>mm_chr6_145862799_145863520
Length = 722
Score = 580 bits (300), Expect = e-170
Identities = 315/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctctagtttagaatctctcaaagaattagttctttctagaaattttttttctt 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 ggaattcctctagtttagaatctctcaaagaattagttctttctagaaattttttt-ctt 262
Query: 64 ttgtttttgtctttgttgactttcacaaacagaagacttctcaggtactgtgtaaatcaa 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 263 ttgtttttgtctttgttgactttcacaaacagaagacttctcaggtactgtgtaaatcga 322
Query: 124 tattgaccatgaaactcatctgaagttagactaatgataatcagccgtcattctgacttt 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 323 tgttgaccatgaaactcatctgaagttagactaatgataatcagccgtcattccgacttt 382
Query: 184 ggaataattacttaccgtttccctgattttacagtttgcctgaggaagagtgtggaatgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggaataattacttaccgtttccctgattttacagtttgcctgaggaagagtgtggaatgt 442
Query: 244 taaagaaggaactcaaaggactaaaagaaagcttggtatttagcctctgagatcaacgtg 303
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taaagaaggaactcagaggactaaaagaaagcttggtatttagcctctgagatcaacgtg 502
Query: 304 gggcgtttgaagacattaaa 323
||||||||||||||||||||
Sbjct: 503 gggcgtttgaagacattaaa 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_e01.g1 MSMg01no191_e01.g1 CHROMAT_FILE:
MSMg01no191_e01.g1 PHD_FILE: MSMg01no191_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:47 2005
(286 letters)
>mm_chr6_145897919_145898604
Length = 686
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%)
Strand = Plus / Minus
Query: 1 agagatgctcccagaaccttccagaacgtggaggcagcaagaacaatgggattgtgatgg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 486 agagatgctcccagaaccttccagaacgtggaggcagcgagaacaatgggattgtgatgg 427
Query: 61 acagcttctgtctgttatcatggcctcacttttcattacagattcagatagatgcacaat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 426 acagcttctgtctgttatcatggcctcacttttcattacagatttagatagatgcacaat 367
Query: 121 aacaaggcacagaaataggtccttcaccttagaatacacacaagaaaggaaaaatagcat 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 366 aacaaggcacagaaataggtccttcactttagaatacacacaagaaaggaaaaatatcat 307
Query: 181 ccaaaaccatgaaacactgagccagagttccttcaacaagtgagaacgggctgcttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccaaaaccatgaaacactgagccagagttccttcaacaagtgagaacgggctgcttggtt 247
Query: 241 cagttgaaagtcatgtatgagactgtgcacgtggttacagcgctgc 286
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 246 cagttgaaagtcatgtatgagactgtgcacgtggttacagtgctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
